DNA

Part:BBa_K2100071:Design

Designed by: Colleen Foley   Group: iGEM16_MIT   (2016-10-19)


pEXPR hEF1a: attB-flipped eYFP-attP


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 6
    Illegal EcoRI site found at 1210
    Illegal EcoRI site found at 3389
    Illegal PstI site found at 337
    Illegal PstI site found at 842
    Illegal PstI site found at 3098
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 6
    Illegal EcoRI site found at 1210
    Illegal EcoRI site found at 3389
    Illegal NheI site found at 2071
    Illegal NheI site found at 2337
    Illegal PstI site found at 337
    Illegal PstI site found at 842
    Illegal PstI site found at 3098
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 6
    Illegal EcoRI site found at 1210
    Illegal EcoRI site found at 3389
    Illegal BglII site found at 591
    Illegal BamHI site found at 1197
    Illegal BamHI site found at 2501
    Illegal XhoI site found at 990
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 6
    Illegal EcoRI site found at 1210
    Illegal EcoRI site found at 3389
    Illegal PstI site found at 337
    Illegal PstI site found at 842
    Illegal PstI site found at 3098
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 6
    Illegal EcoRI site found at 1210
    Illegal EcoRI site found at 3389
    Illegal PstI site found at 337
    Illegal PstI site found at 842
    Illegal PstI site found at 3098
    Illegal NgoMIV site found at 725
    Illegal AgeI site found at 103
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 1948


Design Notes

This composite part expression vector was created by an LR reaction via gateway cloning. It is a promoter (flanked by L4, R1 sites) and a gene (flanked by L1, L2 sites) cloned into a backbone that has a negative selection marker between R4 and R2 sites. This part adheres to RFC 65 for recombination based cloning of mammalian parts.

Source

We synthesized this part from two entry vectors. hEF1a comes from the mammalian genome.

References