Coding
Part:BBa_K1766009:Design
Designed by: Pontus Höjer Group: iGEM15_Stockholm (2015-09-13)
BAR construct 1
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 387
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 236
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
The bacterial antigen receptor (BAR), construct 1, was created by replacing part of the periplasmic domain of EnvZ. Structure prediction of the periplasmic domain of EnvZ revealed a possible PAS domain with a Beta-sheet->Coil->Alpha-helix->Coil structure. This structure was replaced with the Z:HER2:342 affibody with documented affinity towards the human epidermal growth factor receptor (HER2).
Source
Part created through overlap PCR using EnvZ_V5 BBa_K1766008 and Z:HER2:342.