Coding

Part:BBa_K1033002:Experience

Designed by: Lovisa Pettersson   Group: iGEM13_Uppsala   (2013-08-21)


This experience page is provided so that any user may enter their experience using this part.
Please enter how you used this part and how it worked out.

Applications of BBa_K1033002

User Reviews

UNIQ72842545a9af6946-partinfo-00000000-QINU UNIQ72842545a9af6946-partinfo-00000001-QINU

The STS-gene has been used by team UNIK copenhagen 2015 as a part of larger DNA construct that was transformed into another chassis organism moss Physcomitrella patens. P. patens has been shown to produce enzymes similar to 4CL. These enzymes from the Pp4CL family (P. patens) have been shown to have similar function as enzymes from the 4CL family of higher plants. This means that P. Patens only lack the production of STS to produce resveratrol.

The DNA construct we made contained in the following order. A homologous region to the 108 locus on the moss genome (to ensure stable integration into P. patens genome), a nptII-resistance cassette, the Zea mays ubiquitin promoter driving the stilbene synthase gene (STS) linked to yellow fluorescent protein (YFP) with the LP4 linker sequence, terminator and lastly another 108 region. The STS-gene used has a different sequence than BBa_K1033002. This gene was available to us when the project started and has been added to the registry as BBa_K1825008.

Gene construct with STS gene











A few days after transforming this gene construct into P. patens protoplasts we observed YFP expression in several moss protoplasts. This confirms that the transformation was successful and highly suggests that the STS enzyme is expressed.

Transformed P. patens. A) Transformed moss protoplast one a few days after transformation. Scale bar: 0.05 mm B) Wild type moss Scale bar: 0.5 mm. 1) UV filter 350/50 excitation and 420 emission. 2) GFP2 filter with 480/40 excitation and 510 emission. 3) YFP filter with 500/20 excitation and 535/30 emission.





















The moss protoplasts transformed with the STS-construct were left to grow for 6 weeks. After 6 weeks the protoplasts had grown into small moss clumps. Liquid chromatography-mass spectrometry (LC-MS) was then used for the purpose of detecting resveratrol. 100% methanol was used for extraction and both WT moss as a negative control and transformed moss was extracted. Pure resveratrol dissolved in 100% methanol was used as a postive standard. However, the LC-MS machine was not able to detect resveratrol in the transformed moss. This suggests that resveratrol is not produced in the transformed moss. It may also be that the amounts of resveratrol was simply to small to be detected or the amount of transformed moss sample was too small. In conclusion, the presence of YFP suggest that stilbene synthase is expressed in the moss cells, but the expression levels may be too low to produce resveratrol or the enzyme may be dysfunctional.

Great graph.jpg
On top a graph showing peak intensity versus time. A big peak corresponding to 227,1 g/mol is present for the pure resveratrol sample (green line). No such peak is present for WT or transformed STS moss samples (red, purple lines).