Plasmid_Backbone

Part:BBa_J61003

Designed by: John Anderson   Group: Arkin Lab   (2006-07-31)

EN-Ptet-rbs-X-[GFP]-SNP "ORF Expresser"

PBca1021-E0040.jpg

Plasmid for assembly of open reading frame basic parts. A Tet promoter (r0040) and strong ribosome binding site (b0034) lie between the EcoRI and XbaI sites. GFP (just the ORF, E0040) lies between XbaI and SpeI. The part can be used two ways:

  1. Insertion of a standard ORF part into the XbaI/PstI sites results in a Ptet/RBS driven protein generator while retaining the ability to do biobrick assembly.
  2. Insertion of a promoter/RBS cassette (cutting the part with EcoRI/SpeI, inserting into EcoRI/XbaI of J61003) results in a standard pSB1A2 plasmid containing an your promoter/rbs.E0040 composite.

Part J23018 is J61003 with RFP instead of GFP. Part J23019 does the same thing with RFP in a pSB3C6 plasmid backbone. See similar part J61002 for a method of construction for promoter parts, or r0040.part composite parts in pSB1A2.

ApE file:{pBca1021-E0040}

Though not marked in the graphics, the cloning site is flanked by VF2/VR sequencing primer sites. See pSB1A2.

  • RS 19:58, 24 November 2008 (UTC): The original entry of this part included both a plasmid and plasmid backbone. It has been split into a plasmid backbone and part. The physical Registry distribution has been updated accordingly.

The original part is now BBa_J61003-BBa_E0040.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Illegal EcoRI site found at 2058
    Illegal XbaI site found at 2292
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2058
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NotI site found at 9
    Illegal NotI site found at 2064
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2058
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Illegal suffix found at 2
    Illegal EcoRI site found at 2058
    Illegal XbaI site found at 2292
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2058
    Illegal XbaI site found at 2292
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI.rc site found at 1097


[edit]
Categories
//plasmidbackbone/libraryscreening/codingsequence
Parameters
chassis
copies
mcsBioBrick friendly
originColE1
resistanceA