Part:BBa_J18902:Design

pSB1AK3F construction plasmid for protein fusion BioBricks

Assembly Compatibility:

• 10
  INCOMPATIBLE WITH RFC[10]

  Illegal prefix found in sequence at 3177
  Illegal suffix found in sequence at 10
  
• 12
  INCOMPATIBLE WITH RFC[12]

  Illegal EcoRI site found at 3177
  Illegal SpeI site found at 11
  Illegal PstI site found at 25
  Illegal NotI site found at 18
  Illegal NotI site found at 3183
  
• 21
  INCOMPATIBLE WITH RFC[21]

  Illegal EcoRI site found at 3177
  Illegal XhoI site found at 1044
  Illegal XhoI site found at 2070
  
• 23
  INCOMPATIBLE WITH RFC[23]

  Illegal prefix found in sequence at 3177
  Illegal suffix found in sequence at 11
  
• 25
  INCOMPATIBLE WITH RFC[25]

  Illegal prefix found in sequence at 3177
  Illegal suffix found in sequence at 1
  
• 1000
  INCOMPATIBLE WITH RFC[1000]

  Illegal BsaI.rc site found at 2216
  

Design Notes

This plasmid was constructed by PCR and InFusion recombination. 1) The pSB1AK3 vector backbone was linearized by PCR, introducing the NgoMIV / AgeI restriction sites 2) The P1010 insert was amplified by PCR, introducing the NgoMIV / AgeI restriction sites 3) The two overlapping PCR products were recombined using the clonetech InFusion kit.

All PCR reactions were performed with a proof-reading polymerase featuring a very low mutation rate. Nevertheless, the vector backbone may contain mutations with respect to pSB1AC3. Only insert and flanks have been verified by sequencing.

See also:

• pSB1AC3F

• pSB1AT3F

Source

constructed from pSB1AK3