Difference between revisions of "Part:BBa K3598007"

 
Line 2: Line 2:
 
__NOTOC__
 
__NOTOC__
 
<partinfo>BBa_K3598007 short</partinfo>
 
<partinfo>BBa_K3598007 short</partinfo>
 +
 +
  
 
An antimicrobial peptide named CEN1HC-Br, it is isolated and characterized from the green sea urchin and shows broad-spectrum antibacterial activity.
 
An antimicrobial peptide named CEN1HC-Br, it is isolated and characterized from the green sea urchin and shows broad-spectrum antibacterial activity.
  
<!-- Add more about the biology of this part here
 
 
===Usage and Biology===
 
===Usage and Biology===
  
 +
[[File:T--BEIJING 4ELEVEN--CEN_1.png|600px|thumb|center|Figure 1. Part demonstration]]
 +
 +
The CEN1HC-Br coding part was the original sequence of CEN1HC-Br we sent to a synthetic company to produce our CEN1HC-Br AMP. We verified the antimicrobial potency of CEN1HC-Br purchased from the company by adding its solution and placing pieces of paper soaked with its solution to plates inoculated with P. acnes and E. coli MG1655. The results showed inhibition zones in areas of direct contact between bacteria and CEN1HC-Br, which means CEN1HC-Br is effective in killing both bacteria, and would not affect bacteria outside its contact.
 +
[[File:T--BEIJING 4ELEVEN--CEN_2.png|600px|thumb|center|Figure 2. Plate verification result of CEN1HC-Br's ability to kill E. coli]]
 +
[[File:T--BEIJING 4ELEVEN--CEN_3.png|600px|thumb|center|Figure 3. Plate verification result of CEN1HC-Br's ability to kill P. acnes]]
 +
Then, we verified CEN1HC-Br's ability to kill E. coli MG1655 and P. acnes by adding its solution to liquid culture inoculated with the two bacteria. We set the AMP concentration gradient as 0, 2, 4, 8, 12, 16mg/L as a group, 0, 20, 24, 28, 32mg/L as a group, and measured the OD600 of the E. coli through time. Since P. acnes has a slow growth rate, we only measured OD600 after 24 hours of cultivation. The results indicate that CEN1HC-Br's ability to kill E. coli MG1655 peaked at concentrations 24 and 28 mg/L, at 6h and 24h, its effects reaching OD600 of about 0.85 and 1.25. CEN1HC-Br's ability to kill P. acnes peaked at concentration 16mg/L, its effect reaching an OD600 of about 1.8.
 +
[[File:T--BEIJING 4ELEVEN--CEN_4.png|600px|thumb|center|Figure 4. OD600 verification result of CEN1HC-Br's ability to kill E. coli]]
 +
[[File:T--BEIJING 4ELEVEN--CEN_5.png|600px|thumb|center|Figure 5. OD600 verification result of CEN1HC-Br's ability to kill P. acnes]]
 
<!-- -->
 
<!-- -->
 
<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>

Revision as of 06:05, 25 October 2020


CEN1HC-Br


An antimicrobial peptide named CEN1HC-Br, it is isolated and characterized from the green sea urchin and shows broad-spectrum antibacterial activity.

Usage and Biology

Figure 1. Part demonstration

The CEN1HC-Br coding part was the original sequence of CEN1HC-Br we sent to a synthetic company to produce our CEN1HC-Br AMP. We verified the antimicrobial potency of CEN1HC-Br purchased from the company by adding its solution and placing pieces of paper soaked with its solution to plates inoculated with P. acnes and E. coli MG1655. The results showed inhibition zones in areas of direct contact between bacteria and CEN1HC-Br, which means CEN1HC-Br is effective in killing both bacteria, and would not affect bacteria outside its contact.

Figure 2. Plate verification result of CEN1HC-Br's ability to kill E. coli
Figure 3. Plate verification result of CEN1HC-Br's ability to kill P. acnes

Then, we verified CEN1HC-Br's ability to kill E. coli MG1655 and P. acnes by adding its solution to liquid culture inoculated with the two bacteria. We set the AMP concentration gradient as 0, 2, 4, 8, 12, 16mg/L as a group, 0, 20, 24, 28, 32mg/L as a group, and measured the OD600 of the E. coli through time. Since P. acnes has a slow growth rate, we only measured OD600 after 24 hours of cultivation. The results indicate that CEN1HC-Br's ability to kill E. coli MG1655 peaked at concentrations 24 and 28 mg/L, at 6h and 24h, its effects reaching OD600 of about 0.85 and 1.25. CEN1HC-Br's ability to kill P. acnes peaked at concentration 16mg/L, its effect reaching an OD600 of about 1.8.

Figure 4. OD600 verification result of CEN1HC-Br's ability to kill E. coli
Figure 5. OD600 verification result of CEN1HC-Br's ability to kill P. acnes

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]