Difference between revisions of "Part:BBa K3447108"

 
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===Source===
 
===Source===
  
We found this sequence data in the previous iGEM teams (Glasgow 2017 and <partinfo>BBa_I0500</partinfo>) and in GenBank.<br>
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We found this sequence data in GenBank.<br>
  
 
===References===
 
===References===

Latest revision as of 10:24, 27 October 2020


Expression of kanamycin resistance

This is a part with kanamycin resistance gene (BBa_K3447003).

Usage and Biology

It is well-known that kanamycin has the ability to inhibit the growth of bacteria, so we expect that with the expression of KanR gene, our engineered bacteria would be able to survive under the attack of kanamycin.

Characterization

To verify the construction of KanR, the digestion and agarose gel electrophoresis were performed by a standard protocol (Fig. 1A). Compared with the control group, bacteria constructed with KanR show more than 10 times the resistance to kanamycin (Fig. 1B). Zone of inhibition test also shows that our KanR works well with 0.1% kanamycin added (Fig. 1C).

Fig. 1 KanR has resistance of kanamycin. (A) Digestion and electrophoresis of KanR. (B) Functional verification of KanR. E. coli DH5α was transformed with the designed plasmid, cultured overnight, and diluted OD600 to 0.02. Measurement at the indicated time with 0.1% kanamycin added. The experiment was performed three times in triplicate. *, P < 0.05 compared with respective control. (C) Zone of inhibition test. 50 μL suspension was spread over the face of LB agar plate, on which a hole was bored for 0.1% kanamycin added. Incubate at 37℃ for 12 hrs. The plasmid was transformed into E. coli DH5α, cultured overnight, and diluted OD600 to 0.02.

Design

Design Notes

We added some synonymous mutations to avoid part rules.


Source

We found this sequence data in GenBank.

References

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 26
    Illegal NheI site found at 49
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 110
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1
    Illegal BsaI.rc site found at 1039