Difference between revisions of "Part:BBa K2203002"
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Below the results after 1 hour of incubation: | Below the results after 1 hour of incubation: | ||
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<figcaption>1h incubation of T7 LacZalpha in T7 M15 lysate at 37°C</figcaption> | <figcaption>1h incubation of T7 LacZalpha in T7 M15 lysate at 37°C</figcaption> | ||
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<figcaption>1h incubation of no DNA control at 37°C</figcaption> | <figcaption>1h incubation of no DNA control at 37°C</figcaption> | ||
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<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here | ||
Revision as of 17:27, 1 November 2017
T7-lacZalpha
Improvement of the part BBa_I732006 by adding a T7 promoter (BBa_J64997) in front of the coding sequence and a T7 terminator (BBa_K731721) at the end of it to make it applicable for cell-free expression systems containing T7 polymerase
Characterization of T7-lacZalpha in a cell-free chassis
In order to improve the characterization of the T7 LacZalpha fragment, we characterized it in a T7-M15 cell lysate to see whether we obtain high levels of absorbance to use beta-galactosidase and alpha complemetation as our downstream reporter scheme in further experiments. M15 cells have a lacZ delta mutation which makes them encode a form of beta-galactosidase lacking residues 11-41.
Beta-galactosidase produced without those residues is missing a small part and is thus not functional.
But if this mutated form of beta-galactosidase is brought together with the missing lacZ alpha part (which we express in the lysate in this case), the two will connect and form a functional beta-galactosidase part.
In fact beta-galactosidase is a tetramer, it needs four units of LacZalpha and the rest to assemble in order to function.
The figure below shows the expression of a functional beta-galactosidase in T7-M15 cells upon the assembly of the differents alpha and omega parts. For details on how the lysate and the energy solution were made and which components went into the final reaction volume of 10uL, check out our [http://2017.igem.org/Team:EPFL/Protocols protocols].
Incubation reactions showing alpha complementation in T7-M15 cell lysate
We perfromed incubation reactions at 37C of the DNA template in lysate and a no DNA control adding a colorometric substrate to detect the presence of functional beta-galactosidase: CPRG Chlorophenol red-β-D-galactopyranoside.
Below the results after 1 hour of incubation:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]