Tag

Part:BBa_K3815015

Designed by: Alexander Liu   Group: iGEM21_Kyoto   (2021-10-20)
Revision as of 15:01, 20 October 2021 by AlexanderLiu (Talk | contribs) (Usage and Biology)


AANDENYALGA. mutant SsrA degradation tag

Usage and Biology

This is an engineered derivative of wildtype ssrA tag from Escherichia coli, where three C-terminal amino acids LAA in WT are replaced to LGA. Refer to BBa_M0050 for the biological function of the tag.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Result

obtained by mutagenizing the WT tag with mixed primers.


To quantify its efficiency of protein degradation, GFP fluorescence intensity of E.coli overnight culture bearing a plasmid expressing GFP-mutant ssrA tag fusion protein was measured by Qubit, and then compared to that of WT and other mutants.



Improvement from existing parts

This is a part improved from BBa_K1051206. In this part, three C-terminal amino acids LAA were replaced with LGA, resulting in a reduced protein degradation efficiency.





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Parameters
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