Regulatory

Part:BBa_K4061000

Designed by: Diya Agrawal   Group: iGEM21_HKUST   (2021-09-23)
Revision as of 14:34, 23 September 2021 by Registry (Talk | contribs)

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OmpF promoter, controlled by OmpR regulatory protein as part of the Two Component System in E. coli

OmpF promoter is a OmpR regulated promoter that is activated under low medium osmolarity in E. coli especially. This promoter is reciprocally regulated with OmpC promoter (Bba_R0082) depending on the medium osmolarity. OmpF promoter is preferentially expressed in low medium osmolarity. In low osmolarity, the kinase activity of EnvZ (a histidine kinase) is repressed, leading to low concentration of phosphorylated OmpR (OmpR~P). Lower concentration of OmpR~P positively regulates the promoter by binding to high affinity sites (F1, F2, F3). At increased concentration of OmpR~P which occurs at a higher osmolarity, the OmpR~P binds the low affinity F4 site on the promoter which acts a negative regulator and represses the expression of OmpF promoter.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None