Coding

Part:BBa_K3195002

Designed by: JingYuan Liu   Group: iGEM19_SEU-Nanjing-China   (2019-08-22)
Revision as of 01:21, 18 October 2019 by Bread (Talk | contribs) (Usage and Biology)


GST tagged carboxypeptidase Z/N Carboxypeptidase is a class of exopeptidases that can specifically degrade a peptide from its C-terminal of and release free amino acids. In our project, we found Carboxypeptidase Z/N can decompose microcystin RR with another enzyme called subtilisin-like protease.

Usage and Biology

Carboxypeptidase can be found in the animal cell fluid of digestive tract, brain, eye, heart, liver and other tissues[1].According to the difference of serine residues, metal ions and cysteine residues in the active center of carboxypeptidase, carboxypeptidase is divided into serine carboxypeptidase, metal carboxypeptidase and cysteine carboxypeptidase. Carboxypeptidase Z/N is a kind of cysteine carboxypeptidase found in amphioxus (Branchiostoma)[2] which contains cysteine in its catalytic functional domain.This enzyme removes C-terminal Arg residues from substrates, as do many of the other members of the gene family[3]. However it also contains a metallocarboxypeptidase domain. That's why it is called carboxypeptidase Z/N not carboxypeptidase Z or carboxypeptidase N. In our project, we characterised this BioBrick by expressing it in E.coli(BL21). However, this BioBrick can be implemented in any host expression system by cloning it into an appropriate vector.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1813
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 673
    Illegal XhoI site found at 1939
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1906
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 85


[edit]
Categories
//cds/enzyme
//chassis/prokaryote/ecoli
//function/degradation
Parameters
originBranchiostoma belcheri tsingtauense
tagGST Tag