Plasmid_Backbone

Part:BBa_J61002

Designed by: John Anderson   Group: Arkin Lab   (2006-07-31)
Revision as of 16:08, 12 September 2008 by Rshetty (Talk | contribs)

EX-Ptet-S-rbsRFP-P "RFP reporter"

PBca1020-r0040.jpg

Plasmid for construction of promoter basic parts and their derivatives. This plasmid can be used two ways:

  1. Insertion of a promoter element between XbaI and SpeI sites results in a RFP reporter while retaining the ability to do biobrick assembly. Part J61002 is the tet promoter variant of the plasmid.
  2. Insertion of a protein generating device or RNA gene (cutting the part with XbaI/PstI, inserting into SpeI/PstI of J61002) results in a standard pSB1A2 plasmid containing an r0040.yourpart composite.

See similar part J61003 for a similar method of construction for constructing open reading frame parts, or r0040.b0034.your ORF composite parts in pSB1A2. The same procedure can be used with part J23019 for the same effect in a pSB3C6 plasmid backbone.

  • RS 16:08, 12 September 2008 (UTC): Note that this plasmid has been split into a plasmid backbone and part. The plasmid backbone is this part (BBa_J61002) and the part is BBa_R0040. The physical DNA associated with this part has sequence BBa_J61002-R0040.

ApE file:{pBca1020-R0040}

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2927
    Illegal XbaI site found at 2942
    Illegal SpeI site found at 2
    Illegal PstI site found at 885
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2927
    Illegal SpeI site found at 2
    Illegal PstI site found at 885
    Illegal NotI site found at 878
    Illegal NotI site found at 2933
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2927
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2927
    Illegal XbaI site found at 2942
    Illegal SpeI site found at 2
    Illegal PstI site found at 885
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2927
    Illegal XbaI site found at 2942
    Illegal SpeI site found at 2
    Illegal PstI site found at 885
    Illegal AgeI site found at 581
    Illegal AgeI site found at 693
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI.rc site found at 1966


[edit]
Categories
//plasmidbackbone/libraryscreening/promoter
Parameters
chassis
copies
mcsBioBrick friendly
origin
resistanceA