Coding

Part:BBa_K1442040

Designed by: Yin Ho Vong   Group: iGEM14_Warwick   (2014-09-05)
Revision as of 13:30, 31 October 2014 by XIsACross (Talk | contribs)

MS2 bacteriophage coat protein


Regulating the expression of a protein can be achieved through repressive elements; we have the MS2 and MS2 hairpin, which regulate the production of RNA Dependent RNA polymerase (RdRp). As RdRp is fused with MS2 through a P2A linker, an indefinite increase in RdRp production is rate-limited by MS2 production. MS2 is able to bind to the MS2 hairpin sequence, also rate-limiting RdRp production, which in turn regulates the whole replicon system. The iGEM community can benefit from a regulation system, in which MS2 can be fused to a protein of interest to regulate its expression. If the fusion protein is non-functional, engineering restriction sites in the P2A linker and site specific ligation reconstitutes RdRp without the MS2 hairpin. The part derives from Auslander et al, which showed that the MS2 protein-box relationship can be designed for use in synthetic biology to create programmable single-cell mammalian biocomputers with simple expression logic, increasing the complexity of an information processing system without researcher input.



Usage and Biology

The MS2 coat-protein was included in our replicon.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 255
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 255
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 255
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 255
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 255
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 292


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Categories
Parameters
None