Plasmid
pJEJAM14

Part:BBa_K678062

Designed by: DTU-Denmark-2   Group: iGEM11_DTU-Denmark-2   (2011-09-13)
Revision as of 18:59, 27 September 2011 by Jaide (Talk | contribs)

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pJEJAM14

pJEJAM14 is a plasmid that after digestion with NotI is intended to be transformed into Aspergillus nidulans and integrated into the genome by non-homologous end joining. The plasmid consists the strong constitutive gpdA promoter , monomeric red fluorescent protein (mRFP1), the trpC terminator, a pyrG marker cassette for selection, an ori for propagation in E. coli, and an ampR resistance cassette (Figure 1).

DTU-Denmark-2 2011 Figure 1: Plasmid map of pJEJAM14, the figure is not drawn to scale.



When pJEJAM14 was integrated into A. nidulans expression of the gene encoding mRFP1, resulted in an even distribution of mRFP1 in the hyphae (Figure 2 and Figure 3). In figure 4 and figure 5 it be can see that the integration of the linearized pJEJAM14 must have impaired a gene or pathway of the transformant because its morphology and growth differed significantly from the [http://2011.igem.org/Team:DTU-Denmark-2/results/Proofofconcept/fungi#Wild%20type wild-type].

DTU-Denmark-2 2011 Figure 2: Differential interference contrast image of Aspergillus nidulans with pJEJAM14.
DTU-Denmark-2 2011 Figure 2: Fluorescence image of Aspergillus nidulans with pJEJAM14.


DTU-Denmark-2 2011 Figure 2: Aspergillus nidulans Front
DTU-Denmark-2 2011 Figure 2: Aspergillus nidulans Back



Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 3726
    Illegal XbaI site found at 5282
    Illegal XbaI site found at 8026
    Illegal PstI site found at 140
    Illegal PstI site found at 2657
    Illegal PstI site found at 4567
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 910
    Illegal PstI site found at 140
    Illegal PstI site found at 2657
    Illegal PstI site found at 4567
    Illegal NotI site found at 5239
    Illegal NotI site found at 8065
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 144
    Illegal BamHI site found at 3007
    Illegal BamHI site found at 4305
    Illegal XhoI site found at 700
    Illegal XhoI site found at 1082
    Illegal XhoI site found at 4165
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 3726
    Illegal XbaI site found at 5282
    Illegal XbaI site found at 8026
    Illegal PstI site found at 140
    Illegal PstI site found at 2657
    Illegal PstI site found at 4567
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 3726
    Illegal XbaI site found at 5282
    Illegal XbaI site found at 8026
    Illegal PstI site found at 140
    Illegal PstI site found at 2657
    Illegal PstI site found at 4567
    Illegal NgoMIV site found at 3643
    Illegal AgeI site found at 1289
    Illegal AgeI site found at 1437
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 4358
    Illegal BsaI.rc site found at 1116
    Illegal BsaI.rc site found at 3357
    Illegal SapI site found at 322


[edit]
Categories
//chassis/eukaryote
//direction/forward
//plasmid
Parameters
chassisAspergillus nidulans