User:Scmohr/Gray box

< User:Scmohr
Revision as of 14:41, 12 July 2008 by Scmohr (Talk | contribs) (→‎For Protein Coding Sequences -- Enzymes:)

This page will contain drafts of potential "Gray Boxes" for different categories of basic parts.

For all basic parts:

Comments are given in red italics.. Words to appear in the "gray box" are in bold blue. Simple explanatory notes are in plain black text. The intent is for each item in the gray box to have a descriptive, clickable link.

Box Heading:

REFERENCE LINKS FOR ___________ (part number inserted automatically)

Box Content

Source of DNA sequence:

  • GenBank GI: ___________ There are two different kinds of GenBank numbers, GI numbers and Accession/Version numbers. It will be important to have that clarified. (Maybe it doesn't matter as long as they are clickable links...) The GI numbers are less ambiguous.
  • Other: ___________ Possible "other" links include other databases (for example, RNA databases) or a laboratory webpage.

Structure (PDB_ID): ___________

UniProt (Accession No.): ___________

Biological Origin: ___________The link can go to NCBI Taxonomy page -- see, for example, http://www.ncbi.nlm.nih.gov/sites/entrez?db=taxonomy.

Key references: ___________ (Up to three PubMed IDs)

Designer homepage: ___________This link could be to an individual, an iGEM team or a laboratory.


For Protein Coding Sequences -- Enzymes:

Box Heading:

REFERENCE LINKS FOR ___________ (part number inserted automatically)

Box Content

Source of DNA sequence:

  • GenBank GI: ___________ There are two different kinds of GenBank numbers, GI numbers and Accession.Version numbers. It will be important to have that clarified. (Maybe it doesn't matter as long as they are clickable links...)
  • Other: ___________ Possible "other" links include other databases (for example, RNA databases) or a laboratory webpage.

Structure (PDB_ID): ___________

UniProt (Accession No.): ___________

Reaction (EC No.): ___________

Biological Origin: ___________The link can go to NCBI Taxonomy page -- see, for example, http://www.ncbi.nlm.nih.gov/sites/entrez?db=taxonomy.

Key references: ___________ (Up to three PubMed IDs)

Designer homepage: ___________This link could be to an individual, an iGEM team or a laboratory.