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Part:BBa_K1332010

Designed by: Kenta Nomura   Group: iGEM14_Gifu   (2014-09-26)
Revision as of 05:38, 2 November 2014 by Ybanno (Talk | contribs)

mRNA circularization device (3 side)

This part consists of the 5' side of the intron(+exon fragment) from td gene of T4 phage(BBa_K1332004) and a double terminator(BBa_B0015). The protein coding sequence that is inserted between this device and mRNA circularization device (5’ side)(BBa_K1332008) can be circularized. But the 5' side of the intron(+exon fragment) from td gene of T4 phage contains a stop codon, so a circular mRNA made by this part doesn’t cause continuous translation.

explanation of this part

Gifu 5' not remove2.png
Figure 1. mRNA circularization device (3'side)(not endless translation)

Part which surrounded by red closing line is mRNA circularization device (3’side)(not endless translation).(figure 1)
This part has a stop codon, so a circular mRNA made by this part doesn’t cause continuous translation.

How to use

Insert the protein coding sequence between this device and mRNA circularization device (5’ side). How to use this part is same as how to use 5' side device(BBa_K1332008) or 3' side device(endless translation)(BBa_K1332009) . Thus,read that.


When protein coding is RFP coding, its results shows as follow.

Gifu RFP.png
Figure 2.In the case that RFP is inserted as protein coding.
An RFP which we use is BBa_K1332002. That's an RFP which combines with a Histidine tag.


Synthesis of long-chain proteins

Summary of the experiment

Confirm repeating translation by SDS-PAGE([http://2014.igem.org/Team:Gifu/Protocol#SDS protocol]).


Result

Gifu sds remove 2.png
Gifu sds remove 3.png

Figure 3. The result of SDS-PAGE In the case that this part was used {Circular + RFP with stop codon (5’ intron)}, long-chain protein was not synthesized.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Parameters
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