parts.igem.org:Bug reports

Revision as of 08:32, 22 June 2006 by Randy (Talk | contribs)

Specific Concerns:

General Concerns:

  1. Reshma 14:56, 16 Nov 2005 (EST): The registry appears to have some strange behavior when you try to enter a feature is whose starting coordinate is greater than its ending coordinate. It highlights two small stretches of sequence. (I was doing this in an effort to see if I could indicate features on the opposite strand.)
    • Randy The code now detects this and complains. There is now an explicit direction for each feature.
  2. RS 18:31, 13 March 2006 (EST): In part BBa_I51000, the full scar does not appear between BBa_B0045 and BBa_B0046. Two bases at the end of the scar are deleted (AG). I think that there might be a software error because BBa_B0046 begins with an ATG though it is not a coding sequence so the AG should not be deleted.
  3. RS 17:20, 14 March 2006 (EST): I want to rename a part from pSB5AC4 to pSB5AC5. When I enter in the new part name, it doesn't save it.
  4. Rshetty 17:14, 1 June 2006 (EDT): Although CDS's in the reverse orientation now have their graphics displayed properly, -35 and -10 regions do not.
  5. RS 15:48, 2 June 2006 (EDT): pSB5A5 doesn't have any information on it part main page even though it has [http://parts.mit.edu/d/parts/partsdb/part_info.cgi?part_name=pSB5A5 hard information].
    • Fixed with new release - Randy
  6. WingZero 20:14, 11 June 2006 (EDT): Projects page only contains the text "There are no" in bold. Probably should finish that sentence.
    • This hides a larger bug. We have changed the way we select parts from student projects. - Randy
  7. WingZero 21:50, 12 June 2006 (EDT): In MonoBook.css (the default stylesheet), there's a missing semicolon at the end of the line "padding-bottom: .17em" near the very end.
    • Fixed - Randy
  8. WingZero 20:59, 17 June 2006 (EDT): Pages like Add an Intermediate Part have TABLE tags with absolute widths. Whenever the browser window is resized, those sections tend to fall off the page (ie, outside the border from the Wiki software). On that page, at least, I don't really see the need for an absolute width (or even a table, for that matter; should be paragraph tags maybe).
    • R These pages are part of the database section of the Registry and share common formatting. This will not be changing soon.
  9. Smelissali 14:53, 18 June 2006 (EDT): When I try to edit parts in the "Reporter" parts tables, I get an article page that says "There are no". I am also unable to edit the table information for primer parts. Also, if would be nice if under the "parts: hard information" pages, we could have a link that takes the user back to the appropriate parts table for editing.
  10. Randy 20:07, 18 June 2006 (EDT): The search functions do not work well. Mediawiki searches don't find all entries, Google finds the entire history, and 3 part searches only searches the old text fields in the database.
  11. WingZero 16:44, 21 June 2006 (EDT): Maybe minor, maybe not, but pages like Search the Registry, DNA Part Repositories, and other CGI pages have 1) the wrong title (not a big deal) and 2) the top linkbar has the correct name, but the link always points to User:Randy (which may or may not be a security risk if we appear to be logged in as Randy).