Difference between revisions of "Part:BBa K5292405"
(→Abstract) |
|||
Line 22: | Line 22: | ||
===Abstract=== | ===Abstract=== | ||
− | + | ICCG is a mutant of LCC (leaf-branch compost cutinase) specifically designed for plastic degradation. By linking GFP to the C-terminus of the ICCG protein, we constructed an ICCG-GFP fusion protein that allows rapid and convenient quantification of ICCG expression via fluorescence intensity. The fusion protein system is integrated into a high-throughput screening platform to evaluate the regulatory effects of promoters (e.g., DMtac, Mtac) and signal peptides (e.g., MnfaA) on ICCG expression. This design is highly applicable to synthetic biology projects focused on plastic degradation and gene expression optimization.<br> | |
− | + | ||
− | + | ||
− | + | ||
===Profile=== | ===Profile=== |
Latest revision as of 23:18, 1 October 2024
ICCG-GFP
ICCG is a mutant derived from LCC (leaf-branch compost cutinase), an enzyme originating from microorganisms capable of degrading plastic. The ICCG variant was developed through mutations and optimizations of the LCC sequence to enhance its plastic-degrading abilities. GFP (Green Fluorescent Protein) originates from the jellyfish Aequorea victoria, and it is used in the fusion protein as a fluorescent marker. The GSlinker is an artificially designed flexible linker peptide that connects ICCG and GFP while maintaining the functional independence of both proteins.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 72
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 862
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 68
Illegal AgeI site found at 220
Illegal AgeI site found at 621 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1555
Abstract
ICCG is a mutant of LCC (leaf-branch compost cutinase) specifically designed for plastic degradation. By linking GFP to the C-terminus of the ICCG protein, we constructed an ICCG-GFP fusion protein that allows rapid and convenient quantification of ICCG expression via fluorescence intensity. The fusion protein system is integrated into a high-throughput screening platform to evaluate the regulatory effects of promoters (e.g., DMtac, Mtac) and signal peptides (e.g., MnfaA) on ICCG expression. This design is highly applicable to synthetic biology projects focused on plastic degradation and gene expression optimization.
Profile
Name:ICCG-GFP
Base Pairs:1527
Origin:ICCG is a mutant derived from LCC (leaf-branch compost cutinase), an enzyme originating from microorganisms capable of degrading plastic. The ICCG variant was developed through mutations and optimizations of the LCC sequence to enhance its plastic-degrading abilities. GFP (Green Fluorescent Protein) originates from the jellyfish Aequorea victoria, and it is used in the fusion protein as a fluorescent marker. The GSlinker is an artificially designed flexible linker peptide that connects ICCG and GFP while maintaining the functional independence of both proteins
Properties: The ICCG-GFP fusion protein combines the plastic-degrading activity of ICCG with the fluorescence properties of GFP. GFP is linked to the C-terminus of ICCG using a GSlinker, ensuring both proteins maintain their independent functions without interference. The DMtac promoter and MnfaA signal peptide enhance protein expression and secretion, ensuring efficient expression and functional display in *E. coli*. The fluorescence intensity of GFP allows rapid quantification of ICCG expression.
Usage and Biology
The ICCG-GFP fusion protein is primarily used for the rapid quantification of ICCG expression levels in E. coli. By measuring the fluorescence intensity of GFP, it is possible to easily monitor the expression and secretion efficiency of ICCG, making it ideal for screening the regulatory effects of different promoters and signal peptides. The high-throughput screening system accelerates the optimization of promoters (e.g., DMtac, Mtac) and signal peptides (e.g., MnfaA), suitable for synthetic biology projects requiring precise gene expression regulation.
Characterization
We used seamless cloning to construct the GFP protein at the C-terminus of ICCG using the GS linker.
- Through shake flask cultivation and protein purification, we obtained the ICCG-GFP fusion protein sample. The results above indicate that we successfully constructed the correct ICCG-GFP fusion protein.The above results indicate that we successfully constructed the correct ICCG-GFP fusion protein.
- After purifying the ICCG-GFP fusion protein, we measured the fluorescence intensity of protein samples at final concentrations of 0 μg/mL, 2 μg/mL, 4 μg/mL, 8 μg/mL, 16 μg/mL, 32 μg/mL, and 64 μg/mL under excitation wavelength of 488 nm and emission wavelength of 507 nm, resulting in a fluorescence intensity versus protein concentration standard curve
Reference
Tournier V, Topham CM, Gilles A, David B, Folgoas C, Moya-Leclair E, Kamionka E, Desrousseaux ML, Texier H, Gavalda S, Cot M, Guémard E, Dalibey M, Nomme J, Cioci G, Barbe S, Chateau M, André I, Duquesne S, Marty A. An engineered PET depolymerase to break down and recycle plastic bottles. Nature. 2020 Apr;580(7802):216-219. doi: 10.1038/s41586-020-2149-4. Epub 2020 Apr 8. PMID: 32269349.