Difference between revisions of "Part:BBa K5117041"

 
Line 5: Line 5:
 
This part serves as transcriptional unit composed of:
 
This part serves as transcriptional unit composed of:
  
- promoter P<i>cotYZ</i> of <i>Bacillus subtilis</i> (BBa_K5117021),
+
<ul>
 +
<li>promoter P<i>cotYZ</i> of <i>Bacillus subtilis</i> (BBa_K5117021)</li>
  
- ribosome binding site of <i>Bacillus subtilis</i> (BBa_K5117000),
+
<li>ribosome binding site of <i>Bacillus subtilis</i> (BBa_K5117000)</li>
  
- <i>bglB</i> gene of <i>Paenibacillus polymyxa</i> encoding a beta-glucosidase (EC 3.2.1.21),
+
<li><i>bglB</i> gene of <i>Paenibacillus polymyxa</i> encoding a beta-glucosidase (EC 3.2.1.21)</li>
  
addition of a short flexible linker (L1) downstream of the coding sequence encoding the amino acids GA (BBa_K5117029),
+
addition of a short flexible linker (L1) downstream of the coding sequence encoding the amino acids GA (BBa_K5117029)</li>
  
- <i>cotY</i> gene of <i>Bacillus subtilis</i> (BBa_K5117022),
+
<li><i>cotY</i> gene of <i>Bacillus subtilis</i> (BBa_K5117022)</li>
  
- bidirectional terminator B0014 (BBa_B0014).
+
<li>bidirectional terminator B0014 (BBa_B0014)</li>
 +
</ul>
  
  
 +
<b>Biosafety level:</b> S1
 +
 +
<b>Target organism:</b> <i>Bacillus subtilis</i>
 +
 +
<b>Main purpose of use:</b> Immobilization of PpBglB on the spore crust of <i>B. subtilis</i> (spore surface display)
 +
 +
<b>Application:</b> Degradation of cellobiose
  
<!-- Add more about the biology of this part here
 
===Usage and Biology===
 
  
<!-- -->
 
 
<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K5117041 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K5117041 SequenceAndFeatures</partinfo>

Revision as of 15:30, 1 October 2024


PcotYZ-BsRBS-PpBglB-L1-CotY-B0014

This part serves as transcriptional unit composed of:

  • promoter PcotYZ of Bacillus subtilis (BBa_K5117021)
  • ribosome binding site of Bacillus subtilis (BBa_K5117000)
  • bglB gene of Paenibacillus polymyxa encoding a beta-glucosidase (EC 3.2.1.21)
  • addition of a short flexible linker (L1) downstream of the coding sequence encoding the amino acids GA (BBa_K5117029)
  • cotY gene of Bacillus subtilis (BBa_K5117022)
  • bidirectional terminator B0014 (BBa_B0014)


Biosafety level: S1

Target organism: Bacillus subtilis

Main purpose of use: Immobilization of PpBglB on the spore crust of B. subtilis (spore surface display)

Application: Degradation of cellobiose


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1573
  • 1000
    COMPATIBLE WITH RFC[1000]