Difference between revisions of "Part:BBa K5184018"
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SltNPPS (part number), an neryl diphosphate synthase with its N-termial 45 amino acid-trucated. Originally found in Solanum Lycopersium, it is used for transformation of glucose into IPP and DMAPP. Mvan4662 (part number), a farnesyl diphosphate synthase facilitating the formation of longer-chain isoprenoid diphosphates. In our context, it is included for synthesis of Z,Z-FPP from NPP. ShZIS, a zingiberene synthase derived from Solanum habrochaites, catalyzes the formation of sesquiterpenes, a compound with 15 carbons. Specifically, we us ShZIS to produce 7-epi-zingiberene from its substrate Z,Z-FPP. ShZPO, a cytochrome P450 oxygenase found in Solanum habrochaites, carries out two successive oxidations to generate two sesquiterpenes from a monocyclic sesquiterpene as the susbtrate. In our context, ShZPO will act as a zingiberene oxidase, working with its redox partner SlCPR2, a NADPH-cytochrome P450 reductase found in Solanum lycopersicum, to produce the zingiberenoids 9-hydroxy-zingiberene and 9-hydroxy-10,11-epoxyzingiberene from 7-epi-zingiberene. In addition, a spytag-spycatcher system was incorporated, with spytag linked to ShZPO forming an isopeptide bond with the spycathcer linked to SlCPR2. This allows more efficient electron transfer between the two cytochrome P450 enzymes through imitating the colocalization of them on the ER membrane in eukaryotic plants. | SltNPPS (part number), an neryl diphosphate synthase with its N-termial 45 amino acid-trucated. Originally found in Solanum Lycopersium, it is used for transformation of glucose into IPP and DMAPP. Mvan4662 (part number), a farnesyl diphosphate synthase facilitating the formation of longer-chain isoprenoid diphosphates. In our context, it is included for synthesis of Z,Z-FPP from NPP. ShZIS, a zingiberene synthase derived from Solanum habrochaites, catalyzes the formation of sesquiterpenes, a compound with 15 carbons. Specifically, we us ShZIS to produce 7-epi-zingiberene from its substrate Z,Z-FPP. ShZPO, a cytochrome P450 oxygenase found in Solanum habrochaites, carries out two successive oxidations to generate two sesquiterpenes from a monocyclic sesquiterpene as the susbtrate. In our context, ShZPO will act as a zingiberene oxidase, working with its redox partner SlCPR2, a NADPH-cytochrome P450 reductase found in Solanum lycopersicum, to produce the zingiberenoids 9-hydroxy-zingiberene and 9-hydroxy-10,11-epoxyzingiberene from 7-epi-zingiberene. In addition, a spytag-spycatcher system was incorporated, with spytag linked to ShZPO forming an isopeptide bond with the spycathcer linked to SlCPR2. This allows more efficient electron transfer between the two cytochrome P450 enzymes through imitating the colocalization of them on the ER membrane in eukaryotic plants. | ||
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| + | ==Abstract== | ||
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| + | SltNPPS-Mvan4662-ShZIS-st-t25ShZPO-sc-t76SlCPR2 is a pathway of enzymes used for the synthesis of 9HZ and 9H10epoZ in E. coli. SltNPPS transforms IPP and DMAPP from the MVA pathway to NPP. Mvan4662 catalyzes the formation of Z,Z-FPP from NPP. ShZIS produces 7epiZ from Z,Z-FPP. Then, st t25ShZPO is linked to sc t76SlCPR2 via an isopeptide bond formed through the SpyTag-SpyCatcher system for efficient electron transfer and production of 9HZ and 9H10epoZ from 7epiZ. | ||
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===Usage and Biology=== | ===Usage and Biology=== | ||
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| + | SltNPPS is a cis-prenyl transferase from Solanum Lycopersium with its N-terminal 45 amino acid truncated that catalyzes the conversion of geranyl diphosphate into neryl diphosphate. Mvan4662 is a cis-farnesyl diphosphate synthase that catalyzes the transfer of an isopentenyl group from isopentenyl pyrophosphate (IPP) to prenyl diphosphates, facilitating the formation of longer-chain isoprenoid diphosphates. ShZIS is a sesquiterpene synthase derived from Solanum habrochaites, and is present and expressed in the tomato's glandular trichomes. By utilizing three isoprenoid units, ShZIS catalyzes the formation of sesquiterpenes, a compound with 15 carbons. Intermediates that are commonly used include isopentenyl diphosphate (IPP), dimethylallyl diphosphate (DMAPP), and (E,E)-α-farnesyl diphosphate (FPP). t25ShZPO is the truncated version of the plant P450 monooxidase, ShZPO, which is responsible for the two sequential oxidations of 7epiZ to produce 9H10,11epoZ via first a hydroxylation at C9 and then a epoxidation and C10 and C11. It is used collaboratively with t76SlCPR2, which is the truncated version a cytochrome P450 reductase found in Solanum habrochaites. Consisting of two domains, one with a binding site for flavin adenine dinucleotide (FAD) and nicotinamide adenine dinucleotide phosphate (NADPH) and another with a binding site for flavin mononucleotide (FMN). | ||
| + | The SpyTag-SpyCather system was originally found in Streptococcus pyogenes, with its fibronectin-binding protein FbaB containing a domain with a spontaneous isopeptide bond between Lys and Asp. By splitting this domain and rational engineering of the fragments, a peptide (SpyTag) which formed an amide bond to its protein partner (SpyCatcher) in minutes is obtained. | ||
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Revision as of 11:46, 30 September 2024
SltNPPS-Mvan4662-ShZIS-st-t25ShZPO-sc-t76SlCPR2
SltNPPS (part number), an neryl diphosphate synthase with its N-termial 45 amino acid-trucated. Originally found in Solanum Lycopersium, it is used for transformation of glucose into IPP and DMAPP. Mvan4662 (part number), a farnesyl diphosphate synthase facilitating the formation of longer-chain isoprenoid diphosphates. In our context, it is included for synthesis of Z,Z-FPP from NPP. ShZIS, a zingiberene synthase derived from Solanum habrochaites, catalyzes the formation of sesquiterpenes, a compound with 15 carbons. Specifically, we us ShZIS to produce 7-epi-zingiberene from its substrate Z,Z-FPP. ShZPO, a cytochrome P450 oxygenase found in Solanum habrochaites, carries out two successive oxidations to generate two sesquiterpenes from a monocyclic sesquiterpene as the susbtrate. In our context, ShZPO will act as a zingiberene oxidase, working with its redox partner SlCPR2, a NADPH-cytochrome P450 reductase found in Solanum lycopersicum, to produce the zingiberenoids 9-hydroxy-zingiberene and 9-hydroxy-10,11-epoxyzingiberene from 7-epi-zingiberene. In addition, a spytag-spycatcher system was incorporated, with spytag linked to ShZPO forming an isopeptide bond with the spycathcer linked to SlCPR2. This allows more efficient electron transfer between the two cytochrome P450 enzymes through imitating the colocalization of them on the ER membrane in eukaryotic plants.
Abstract
SltNPPS-Mvan4662-ShZIS-st-t25ShZPO-sc-t76SlCPR2 is a pathway of enzymes used for the synthesis of 9HZ and 9H10epoZ in E. coli. SltNPPS transforms IPP and DMAPP from the MVA pathway to NPP. Mvan4662 catalyzes the formation of Z,Z-FPP from NPP. ShZIS produces 7epiZ from Z,Z-FPP. Then, st t25ShZPO is linked to sc t76SlCPR2 via an isopeptide bond formed through the SpyTag-SpyCatcher system for efficient electron transfer and production of 9HZ and 9H10epoZ from 7epiZ.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]