Difference between revisions of "Part:BBa K5034201"
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__TOC__
  
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===Description===
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The pYYDT plasmid is a synthetic plasmid backbone used in various genetic engineering applications in microbial systems.
  
 
===Sequence and Features===
 
===Sequence and Features===
 
<partinfo>BBa_K5034201 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K5034201 SequenceAndFeatures</partinfo>
  
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===Description===
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===Applications===
  
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The pYYDT plasmid is a synthetic plasmid backbone used in various genetic engineering applications in microbial systems.
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1. It can be used in microbial fuel cells to study and enhance the extracellular electron transfer capabilities such as in <i>S. oneidensis</i>.
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2. It can be used as a backbone for CRISPR-based genome editing systems, enabling precise genetic modifications.
  
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===Applications===
 
  
 
===Reference===
 
===Reference===
  
 
Yang, Y., Wu, Y., Hu, Y., Cao, Y., Poh, C. L., Cao, B., & Song, H. (2015). Engineering Electrode-Attached Microbial Consortia for High-Performance Xylose-Fed Microbial Fuel Cell. ACS Catalysis, 5(11), 6937-6945. DOI: 10.1021/acscatal.5b01733.
 
Yang, Y., Wu, Y., Hu, Y., Cao, Y., Poh, C. L., Cao, B., & Song, H. (2015). Engineering Electrode-Attached Microbial Consortia for High-Performance Xylose-Fed Microbial Fuel Cell. ACS Catalysis, 5(11), 6937-6945. DOI: 10.1021/acscatal.5b01733.

Revision as of 06:50, 30 September 2024


pBBR1MCS-terminator plasmid

Description

The pYYDT plasmid is a synthetic plasmid backbone used in various genetic engineering applications in microbial systems.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 4981
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NotI site found at 9
    Illegal NotI site found at 2834
    Illegal NotI site found at 4987
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 4981
    Illegal BglII site found at 3580
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 4981
    Illegal suffix found at 2
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 4981
    Plasmid lacks a suffix.
    Illegal XbaI site found at 4996
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NgoMIV site found at 562
    Illegal NgoMIV site found at 4244
    Illegal NgoMIV site found at 4527
    Illegal AgeI site found at 402
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.

Applications

1. It can be used in microbial fuel cells to study and enhance the extracellular electron transfer capabilities such as in S. oneidensis. 2. It can be used as a backbone for CRISPR-based genome editing systems, enabling precise genetic modifications.


Reference

Yang, Y., Wu, Y., Hu, Y., Cao, Y., Poh, C. L., Cao, B., & Song, H. (2015). Engineering Electrode-Attached Microbial Consortia for High-Performance Xylose-Fed Microbial Fuel Cell. ACS Catalysis, 5(11), 6937-6945. DOI: 10.1021/acscatal.5b01733.