Difference between revisions of "Part:BBa K4712015"

 
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<partinfo>BBa_K4712015 parameters</partinfo>
 
<partinfo>BBa_K4712015 parameters</partinfo>
 
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 +
Apparatus:
 +
Thermal Cycler, Centrifuge, Fluorescence Quantitative PCR Instrument (Ya Rui), 2mL reaction tube, Pipette and Pipette Tip
 +
Materials:
 +
1. DNA Isothermal Amplification Kit (EZ-Life Biotechnology)
 +
2. ddH2O
 +
3. Thermostatic amplification specific primers:
 +
  INFB-F1、 INFB-R1
 +
  INFB-F2、 INFB-R2
 +
  INFB-F3、 INFB-R3
 +
  INFB-F4、 INFB-R4
 +
  INFB-F5、 INFB-R5
 +
  H1N1-F6、H1N1-R6
 +
  H1N1-F7、H1N1-R7
 +
  H1N1-F8、H1N1-R8
 +
4. DL500 marker
 +
5. Test sample: DNA Template（pUC57-M1）Concentration：1000cps/μL
 +
Storage: -20°C
 +
Methods:
 +
1. For a 20μL reaction system:
 +
 +
<table>
 +
<thead>
 +
  <tr>
 +
    <th>Reagent</th>
 +
    <th>Stock Concentration</th>
 +
    <th>Volume Added（μL）</th>
 +
  </tr>
 +
</thead>
 +
<tbody>
 +
  <tr>
 +
    <td>Forward Primer</td>
 +
    <td>10μM</td>
 +
    <td>1</td>
 +
  </tr>
 +
  <tr>
 +
    <td>Reverse Primer</td>
 +
    <td>10μM</td>
 +
    <td>1</td>
 +
  </tr>
 +
  <tr>
 +
    <td>Rehydration Buffer (2X)</td>
 +
    <td></td>
 +
    <td>10</td>
 +
  </tr>
 +
  <tr>
 +
    <td>DNA Template</td>
 +
    <td>10nM/L</td>
 +
    <td>2</td>
 +
  </tr>
 +
  <tr>
 +
    <td>H2O</td>
 +
    <td></td>
 +
    <td>To 18</td>
 +
  </tr>
 +
  <tr>
 +
    <td>Starter (10X)</td>
 +
    <td></td>
 +
    <td>2</td>
 +
  </tr>
 +
</tbody>
 +
</table>
 +
 +
https://static.igem.wiki/teams/4712/wiki/result/fig1b.png

Revision as of 11:58, 12 October 2023


H1N1-R8

The primers were designed using NCBI BLAST and SanpGene to achieve efficient and specific amplification. This primer in RPA serves as the initial binding point for the amplification process, ensuring the specificity of the reaction by targeting the desired Influenza A virus(2009H1N1) DNA or RNA sequences. The primers provided data for mathematical modeling for further primer design.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Apparatus: Thermal Cycler, Centrifuge, Fluorescence Quantitative PCR Instrument (Ya Rui), 2mL reaction tube, Pipette and Pipette Tip Materials: 1. DNA Isothermal Amplification Kit (EZ-Life Biotechnology) 2. ddH2O 3. Thermostatic amplification specific primers: 

 INFB-F1、 INFB-R1
 INFB-F2、 INFB-R2
 INFB-F3、 INFB-R3
 INFB-F4、 INFB-R4
 INFB-F5、 INFB-R5
 H1N1-F6、H1N1-R6
 H1N1-F7、H1N1-R7
 H1N1-F8、H1N1-R8

4. DL500 marker 5. Test sample: DNA Template（pUC57-M1）Concentration：1000cps/μL Storage: -20°C Methods: 1. For a 20μL reaction system:

<thead> </thead> <tbody> </tbody>
Reagent Stock Concentration Volume Added（μL）
Forward Primer 10μM 1
Reverse Primer 10μM 1
Rehydration Buffer (2X) 10
DNA Template 10nM/L 2
H2O To 18
Starter (10X) 2

fig1b.png