Difference between revisions of "Part:BBa K4779002"
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It is a copper ion reaction reporting pathway in Saccharomyces cerevisiae. We employed a positive feedback regulation with Ste5ΔN-CTM for signal amplification. In addition, we utilized the prm1 promoter for both GFP and Ste5ΔN-CTM expression. | It is a copper ion reaction reporting pathway in Saccharomyces cerevisiae. We employed a positive feedback regulation with Ste5ΔN-CTM for signal amplification. In addition, we utilized the prm1 promoter for both GFP and Ste5ΔN-CTM expression. | ||
− | < | + | ===Construction=== |
− | === | + | CMPS is a new composite part (BBa_K4779002). We obtained the gene sequences of the promoter of Cup1 (BBa_K945002), MFα2 (BBa_K110005), the promoter of prm1 (BBa_K1346004), green fluorescent protein (GFP) (BBa_K3112009), Ste5ΔN-CTM (BBa_K3384315) and the terminator CYC1 (BBa_K4278703) from IGEM, and sent them to GENEWIZ (Suzhou Genewiz Biotechnology Co., Ltd.) for synthesis. |
+ | |||
+ | <br> | ||
+ | <p> </p> | ||
+ | <div> | ||
+ | https://static.igem.wiki/teams/4779/wiki/nanjing-bioxstem-cmps.png | ||
+ | </div> | ||
+ | |||
+ | ===Characterization=== | ||
+ | We subjected the engineered yeast strain BY4741-pRS415-CMPS samples to a copper ion gradient treatment and quantitatively measured their fluorescence intensity at different copper ion concentrations, as depicted in the graph. Within 500 uM, the signal output intensity of the CMPS sensor increased with an ascending copper ion concentration and nearly reached its peak at 50 uM. In comparison to CMPG, which reached its signal output peak at 200 uM, CMPS achieved comparable signal output intensity at lower copper ion concentrations, indicating an improved sensitivity. | ||
+ | |||
+ | <br> | ||
+ | <p> </p> | ||
+ | <div> | ||
+ | https://static.igem.wiki/teams/4779/wiki/nanjing-bioxstem-pprm1-pro2.png | ||
+ | </div> | ||
+ | |||
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Revision as of 19:15, 11 October 2023
CMPS:A yeast copper-induced reporter pathway with Positive feedback loop in with prm1 promoter
It is a copper ion reaction reporting pathway in Saccharomyces cerevisiae. We employed a positive feedback regulation with Ste5ΔN-CTM for signal amplification. In addition, we utilized the prm1 promoter for both GFP and Ste5ΔN-CTM expression.
Construction
CMPS is a new composite part (BBa_K4779002). We obtained the gene sequences of the promoter of Cup1 (BBa_K945002), MFα2 (BBa_K110005), the promoter of prm1 (BBa_K1346004), green fluorescent protein (GFP) (BBa_K3112009), Ste5ΔN-CTM (BBa_K3384315) and the terminator CYC1 (BBa_K4278703) from IGEM, and sent them to GENEWIZ (Suzhou Genewiz Biotechnology Co., Ltd.) for synthesis.
Characterization
We subjected the engineered yeast strain BY4741-pRS415-CMPS samples to a copper ion gradient treatment and quantitatively measured their fluorescence intensity at different copper ion concentrations, as depicted in the graph. Within 500 uM, the signal output intensity of the CMPS sensor increased with an ascending copper ion concentration and nearly reached its peak at 50 uM. In comparison to CMPG, which reached its signal output peak at 200 uM, CMPS achieved comparable signal output intensity at lower copper ion concentrations, indicating an improved sensitivity.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 2657
Illegal XbaI site found at 279
Illegal XbaI site found at 517
Illegal SpeI site found at 343
Illegal SpeI site found at 523
Illegal SpeI site found at 3912
Illegal SpeI site found at 4458
Illegal PstI site found at 49 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 2657
Illegal SpeI site found at 343
Illegal SpeI site found at 523
Illegal SpeI site found at 3912
Illegal SpeI site found at 4458
Illegal PstI site found at 49 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 2657
Illegal BglII site found at 55
Illegal BglII site found at 3105
Illegal BglII site found at 4413
Illegal BamHI site found at 510
Illegal XhoI site found at 8
Illegal XhoI site found at 4350 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 2657
Illegal XbaI site found at 279
Illegal XbaI site found at 517
Illegal SpeI site found at 343
Illegal SpeI site found at 523
Illegal SpeI site found at 3912
Illegal SpeI site found at 4458
Illegal PstI site found at 49 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 2657
Illegal XbaI site found at 279
Illegal XbaI site found at 517
Illegal SpeI site found at 343
Illegal SpeI site found at 523
Illegal SpeI site found at 3912
Illegal SpeI site found at 4458
Illegal PstI site found at 49
Illegal NgoMIV site found at 36 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 2213
Illegal SapI site found at 529