Difference between revisions of "Part:BBa K4621092"
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<partinfo>BBa_K4621092 short</partinfo> | <partinfo>BBa_K4621092 short</partinfo> | ||
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| + | ===Usage, Biology and Characterization=== | ||
Pro503 contains the promoter of GQS52_06720 in SCUT-3. The promoter model predicted that the promoter expression intensity was about 50 % of Pro1007（BBa_K3880007）. The fusion promoter composed of Pro503（BBa_K4621041）and ProP（BBa_K4621004）can control the gene expression switch while controlling its expression intensity. | Pro503 contains the promoter of GQS52_06720 in SCUT-3. The promoter model predicted that the promoter expression intensity was about 50 % of Pro1007（BBa_K3880007）. The fusion promoter composed of Pro503（BBa_K4621041）and ProP（BBa_K4621004）can control the gene expression switch while controlling its expression intensity. | ||
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| + | ===Testing and validation=== | ||
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Pro503 was inserted into the chitin-inducible promoter ProP to form a fusion promoter. The regulation of gene expression can be achieved by placing it before the coding of the target gene. In our study, Pro503 stably expressed the target gene under the premise of chitin induction to control the production of ectoine and hydroxyectoine. We verified its regulation effect by LB fermentation. | Pro503 was inserted into the chitin-inducible promoter ProP to form a fusion promoter. The regulation of gene expression can be achieved by placing it before the coding of the target gene. In our study, Pro503 stably expressed the target gene under the premise of chitin induction to control the production of ectoine and hydroxyectoine. We verified its regulation effect by LB fermentation. | ||
| + | For the experimenting group, we added chitin at 24 h to induce expression, and extended the total fermentation time to 5 days, to test the general accumulation. | ||
| + | https://static.igem.wiki/teams/4621/wiki/parts/fermentation-with-an-inducible-promoter.png | ||
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| + | We are surprising by the effect when combining the ProP with p24880 (p1007 & p1008), however, the results are seemingly incompatible with other data that higher expression leads to decrease on production. This phenomenon may be explained by the hypothesis of severe overexpressing leading to rapid reduction on growth and survival of SCUT-3, that p24880 carrier yield a large amount of ectoine and hydroxyectoine once induced by chitin, leading to immediate reduction in the general metabolism due to loss of living bacteria. If this case is true, p24880 is still not sufficient for long-period fermentation, and should be optimized sorely. | ||
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Latest revision as of 19:34, 10 October 2023
Fusion promoter composed of Pro503 and ProP
Usage, Biology and Characterization
Pro503 contains the promoter of GQS52_06720 in SCUT-3. The promoter model predicted that the promoter expression intensity was about 50 % of Pro1007（BBa_K3880007）. The fusion promoter composed of Pro503（BBa_K4621041）and ProP（BBa_K4621004）can control the gene expression switch while controlling its expression intensity.
Testing and validation
Pro503 was inserted into the chitin-inducible promoter ProP to form a fusion promoter. The regulation of gene expression can be achieved by placing it before the coding of the target gene. In our study, Pro503 stably expressed the target gene under the premise of chitin induction to control the production of ectoine and hydroxyectoine. We verified its regulation effect by LB fermentation.
For the experimenting group, we added chitin at 24 h to induce expression, and extended the total fermentation time to 5 days, to test the general accumulation.
We are surprising by the effect when combining the ProP with p24880 (p1007 & p1008), however, the results are seemingly incompatible with other data that higher expression leads to decrease on production. This phenomenon may be explained by the hypothesis of severe overexpressing leading to rapid reduction on growth and survival of SCUT-3, that p24880 carrier yield a large amount of ectoine and hydroxyectoine once induced by chitin, leading to immediate reduction in the general metabolism due to loss of living bacteria. If this case is true, p24880 is still not sufficient for long-period fermentation, and should be optimized sorely.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 254
Illegal AgeI site found at 284 - 1000COMPATIBLE WITH RFC[1000]