Difference between revisions of "Part:BBa K260004:Design"

 
(→‎Design Notes)
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__NOTOC__
 
__NOTOC__
 
<partinfo>BBa_K260004 short</partinfo>
 
<partinfo>BBa_K260004 short</partinfo>
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===Design Notes===
 
===Design Notes===
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The 50 bp homologies were designed to delete 100 bp of [[Part:BBa_K260001|]]-[[Part:BBa_K260016|]] and put the FRT site of [[Part:BBa_K260015|]] (if used with the present backbone [[Part:BBa_K260004|]]) at a defined distance from the FRT site of [[Part:BBa_K260016|]].
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The 70 bp homologies were designed to delete 100 bp of [[Part:BBa_K260001|BBa_K260001]]-[[Part:BBa_K260016|BBa_K260016]] and put the FRT site of [[Part:BBa_K260015|BBa_K260015]] (if used with the present backbone '''BBa_K260004''') at a defined distance from the FRT site of [[Part:BBa_K260016|BBa_K260016]].
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===Source===
 
===Source===
  
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Geneart plasmid pMA, with 2x 50 bp from pCC2FosMB [[Part:K260001|]].
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Geneart plasmid pMA, with 2x 50 bp from pCC2FosMB [[Part:K260001|K260001]].
  
 
===References===
 
===References===

Revision as of 07:28, 18 October 2009

pMA-@CC2FosMB-00500bp


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2544
    Illegal NheI site found at 52
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NotI site found at 9
    Illegal NotI site found at 2550
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2544
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 2544
    Illegal suffix found at 2
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 2544
    Plasmid lacks a suffix.
    Illegal XbaI site found at 2559
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.


Design Notes

The 70 bp homologies were designed to delete 100 bp of BBa_K260001-BBa_K260016 and put the FRT site of BBa_K260015 (if used with the present backbone BBa_K260004) at a defined distance from the FRT site of BBa_K260016.

Source

Geneart plasmid pMA, with 2x 50 bp from pCC2FosMB K260001.

References