Difference between revisions of "Part:BBa K4719004"
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<partinfo>BBa_K4719004 short</partinfo> | <partinfo>BBa_K4719004 short</partinfo> | ||
− | + | ===Introduction=== | |
+ | Vilnius Lithuania iGEM 2023 team's goal was to create a universal synthetic biology system in ''Komagataeibacter xylinus'' for ''in vivo'' bacterial cellulose polymer composition modification. Firstly, we chose to produce a cellulose-chitin polymer that would later be deacetylated, creating bacterial cellulose-chitosan. This polymer is an easily modifiable platform when compared to bacterial cellulose. The enhanced chemical reactivity of bacterial cellulose-chitosan polymer allows for specific functionalizations in the biomedicine field, such as scaffold design. | ||
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+ | Bacterial cellulose-chitin polymer was achieved by increasing the production of UDP-N-acetylglucosamine (UDP-GlcNAc), which can be recognized as a viable substrate for cellulose synthase and incorporated in bacterial cellulose polymer. We employed two strategies to produce this material. The first approach was to add N-acetylglucosamine into the growth medium [https://parts.igem.org/Part:BBa_K4719013 BBa_K4719013], and the second one was the production of N-acetylglucosamine by ''K. xylinus'' from simple sugars such as glucose, fructose, and saccharose in the growth medium [https://parts.igem.org/Part:BBa_K4719014 BBa_K4719014]. | ||
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===Usage and Biology=== | ===Usage and Biology=== | ||
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+ | GFA1 is glutamine-fructose-6-phosphate aminotransferase. This enzyme catalyzes the formation of glucosamine-6-phosphate and glutamate from fructose-6-phosphate and glutamine. This is a crucial step in our system, that produces bacterial cellulose-chitin polymer from simple sugars in the growth medium. GFA1 is used as a part in [https://parts.igem.org/Part:BBa_K4719014 BBa_K4719014]. | ||
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Revision as of 19:32, 9 September 2023
GFA1
Introduction
Vilnius Lithuania iGEM 2023 team's goal was to create a universal synthetic biology system in Komagataeibacter xylinus for in vivo bacterial cellulose polymer composition modification. Firstly, we chose to produce a cellulose-chitin polymer that would later be deacetylated, creating bacterial cellulose-chitosan. This polymer is an easily modifiable platform when compared to bacterial cellulose. The enhanced chemical reactivity of bacterial cellulose-chitosan polymer allows for specific functionalizations in the biomedicine field, such as scaffold design.
Bacterial cellulose-chitin polymer was achieved by increasing the production of UDP-N-acetylglucosamine (UDP-GlcNAc), which can be recognized as a viable substrate for cellulose synthase and incorporated in bacterial cellulose polymer. We employed two strategies to produce this material. The first approach was to add N-acetylglucosamine into the growth medium BBa_K4719013, and the second one was the production of N-acetylglucosamine by K. xylinus from simple sugars such as glucose, fructose, and saccharose in the growth medium BBa_K4719014.
Usage and Biology
GFA1 is glutamine-fructose-6-phosphate aminotransferase. This enzyme catalyzes the formation of glucosamine-6-phosphate and glutamate from fructose-6-phosphate and glutamine. This is a crucial step in our system, that produces bacterial cellulose-chitin polymer from simple sugars in the growth medium. GFA1 is used as a part in BBa_K4719014.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 361
Illegal EcoRI site found at 859
Illegal XbaI site found at 1459 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 361
Illegal EcoRI site found at 859 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 361
Illegal EcoRI site found at 859
Illegal BglII site found at 1318 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 361
Illegal EcoRI site found at 859
Illegal XbaI site found at 1459 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 361
Illegal EcoRI site found at 859
Illegal XbaI site found at 1459 - 1000COMPATIBLE WITH RFC[1000]