Difference between revisions of "Part:BBa K4169029:Design"

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m (→‎Design Notes)
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V344C-F: GACGACATCCGTTGTTGTATCGGCTG
 
V344C-F: GACGACATCCGTTGTTGTATCGGCTG
 +
 
V344C-R: CAGCCGATACAACAACGGATGTCGTC
 
V344C-R: CAGCCGATACAACAACGGATGTCGTC
  

Revision as of 07:58, 12 October 2022


Mutated TMADH


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 388
    Illegal PstI site found at 183
    Illegal PstI site found at 1782
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 388
    Illegal PstI site found at 183
    Illegal PstI site found at 1782
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 388
    Illegal XhoI site found at 1717
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 388
    Illegal PstI site found at 183
    Illegal PstI site found at 1782
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 388
    Illegal PstI site found at 183
    Illegal PstI site found at 1782
    Illegal AgeI site found at 879
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

GenScript synthesised tmd plasmids and performed codon optimization. We added His tag on the end of tmd sequence. Then optimized trimethylamine dehydrogenase, mutated amino acid 344 form Val to Cys.The primers we designed for mutation are showned below:

V344C-F: GACGACATCCGTTGTTGTATCGGCTG

V344C-R: CAGCCGATACAACAACGGATGTCGTC

Source

111

References