Difference between revisions of "Part:BBa K4437002"

 
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__NOTOC__
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<partinfo>BBa_K4437001 short</partinfo>
  
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===Usage and Biology===
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<p>Derived from <I>Lactococcus lactis</I>, nisin is a food-safe, antimicrobial peptide (AMP) that targets a wide range of Gram-positive bacteria by binding to lipid II on the pathogens membrane, creating a pore, and causing cell death [1]. Literature suggests that nisin Q (NisQ) demonstrates greater antimicrobial and antioxidant activity against pathogens compared to other variants of nisin, such as NisA (BBa_K1365000) [2]. Nisin’s optimal pH stability is between 2 and 7 but can maintain its antibacterial activity up to a pH of 12, and can also retain its antimicrobial activity at temperatures of 120<sup>o</sup>C [2]. The addition of NusA is a functional sequence. Unlike other AMPs, nisin is non-toxic to Gram-negative bacteria, meaning that successful recombinant expression in E. coli can be achieved without an inhibitory protein.</p>
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===Design===
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<p>Nisin GB1 (BBa_K4437001) includes, a T7 promoter, a lac operon, RBS, TEV protease site, 6XHis-tag, two enterokinase cut sites, nisQ, and T7 terminator. The two enterokinase sites serves to make sure the 6XHis-tag is cleaved off and surely leaves us with nisQ. The lac operon functions to be able to use different protein induction media such as autoinduction medias when expression protein. The presence of the lac operon will allow the bacteria to switch from a glucose sugar source to a lactose sugar source. The addition of NusA to the sequence allows for better solubility as it serves a function as a solubility tag. The rest if the elements are regulatory elements necessary to express our protein.</p>
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===Sequence and Features===
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<partinfo>BBa_K4437002 SequenceAndFeatures</partinfo>
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<!-- Uncomment this to enable Functional Parameter display
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===Functional Parameters===
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<partinfo>BBa_K4437001 parameters</partinfo>
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<!-- -->
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===References===
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<ol>
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<li>Zhou H, Fang J, Tian Y, Lu XY. Mechanisms of nisin resistance in Gram-positive bacteria. Annals of microbiology. 2014 Jun;64(2):413-20.</li>
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<li>Mai HT, Van Hau N, Nghia NH, Thao DT. Expression and Purification of Nisin in Escherichia coli. Int. J. Life. Sci. Scienti. Res. eISSN. 2018 Jul;2455(1716):1716.</li>
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</ol>

Revision as of 05:28, 12 October 2022

NisQ with a N-terminus 6x His-tag (NisQ-His)

Usage and Biology

Derived from Lactococcus lactis, nisin is a food-safe, antimicrobial peptide (AMP) that targets a wide range of Gram-positive bacteria by binding to lipid II on the pathogens membrane, creating a pore, and causing cell death [1]. Literature suggests that nisin Q (NisQ) demonstrates greater antimicrobial and antioxidant activity against pathogens compared to other variants of nisin, such as NisA (BBa_K1365000) [2]. Nisin’s optimal pH stability is between 2 and 7 but can maintain its antibacterial activity up to a pH of 12, and can also retain its antimicrobial activity at temperatures of 120oC [2]. The addition of NusA is a functional sequence. Unlike other AMPs, nisin is non-toxic to Gram-negative bacteria, meaning that successful recombinant expression in E. coli can be achieved without an inhibitory protein.

Design

Nisin GB1 (BBa_K4437001) includes, a T7 promoter, a lac operon, RBS, TEV protease site, 6XHis-tag, two enterokinase cut sites, nisQ, and T7 terminator. The two enterokinase sites serves to make sure the 6XHis-tag is cleaved off and surely leaves us with nisQ. The lac operon functions to be able to use different protein induction media such as autoinduction medias when expression protein. The presence of the lac operon will allow the bacteria to switch from a glucose sugar source to a lactose sugar source. The addition of NusA to the sequence allows for better solubility as it serves a function as a solubility tag. The rest if the elements are regulatory elements necessary to express our protein.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1451
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1711
  • 1000
    COMPATIBLE WITH RFC[1000]


References

  1. Zhou H, Fang J, Tian Y, Lu XY. Mechanisms of nisin resistance in Gram-positive bacteria. Annals of microbiology. 2014 Jun;64(2):413-20.
  2. Mai HT, Van Hau N, Nghia NH, Thao DT. Expression and Purification of Nisin in Escherichia coli. Int. J. Life. Sci. Scienti. Res. eISSN. 2018 Jul;2455(1716):1716.