Difference between revisions of "Part:BBa K200009"

(Detail)
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===Detail===
 
===Detail===
 
This is a Type II restriction enzyme that recognises the nucleotide sequence 'GATC.'  Its activity is blocked by dam methylation.
 
This is a Type II restriction enzyme that recognises the nucleotide sequence 'GATC.'  Its activity is blocked by dam methylation.
 
 
The working temperature is 37°C.
 
The working temperature is 37°C.
 
The gene was used alongside with the restriction enzyme TaqI and the methylase Dam by the Imperial iGEM 2009 [http://2009.igem.org/Team:Imperial_College_London <i>The E.ncapsulator</i>] project as part of the genome deletion module.
 
 
 
  
  
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The gene was used alongside with the restriction enzyme TaqI and the methylase Dam by the Imperial iGEM 2009 [http://2009.igem.org/Team:Imperial_College_London <i>The E.ncapsulator</i>] project as part of the genome deletion module.
Methylation Sensitivity:  
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dam methylation: Blocked
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dcm methylation: Not sensitive
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CpG methylation: Not sensitive
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More information about: Methylation Sensitivity
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+
Heat Inactivation:
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65°C for 20 minutes
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Survival in a Reaction:
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(+ + +) Suitable for an extended or overnight digestion. Enzyme is active > 8 hours.
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More information about: Extended Digests with Restriction Enzymes
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Revision as of 14:15, 29 September 2009

DpnII Composite

This sequence codes for the restriction enzyme DpnII.


Detail

This is a Type II restriction enzyme that recognises the nucleotide sequence 'GATC.' Its activity is blocked by dam methylation. The working temperature is 37°C.


DpnII is a 4 base cutter, leaving a 4 base overhang.


The cutting site is as shown:

II09 DpnII.png

Usage and Biology

Enzyme Properties can be viewed at the [http://www.neb.com/nebecomm/products/productR0543.asp DpnII Datasheet] from New England Biolabs


The gene was used alongside with the restriction enzyme TaqI and the methylase Dam by the Imperial iGEM 2009 [http://2009.igem.org/Team:Imperial_College_London The E.ncapsulator] project as part of the genome deletion module.


Sequence and Features

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

References

[http://www.neb.com/nebecomm/products/productR0543.asp Information from NEB]