Difference between revisions of "Part:BBa K4197021"

 
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OmpA_Ana o 3 fusion + mSCARLET-I with ihfb800 promoter
 
OmpA_Ana o 3 fusion + mSCARLET-I with ihfb800 promoter
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<html>
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<h2>Introduction</h2>
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<p>The part expressing the gene of cashew nut Ana o 3 (<a href="https://parts.igem.org/Part:BBa_K4197007">K4197007</a>) has been completed with the ihfb800-mScarlet construction (<a href="https://parts.igem.org/Part:BBa_K41970022">K41970022</a>) to express red
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fluorescence. This red fluorescence allows sorting of bacteria by FACS. </p>
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<h2>Construction</h2>
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<p>The ihfb800-mScarlet construction was amplified by PCR with the high-fidelity Phusion polymerase using IF3_mSCARLET-I F (ttatttgtacagttcatccataccacc) and
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IF4_mSCARLET-I R (atggtttctaaaggtgaagcagtg) primers. The expected size of the amplicon is 699 bp. The fragment was inserted on the linearized plasmid pET21b(+) with
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Ana o 3 (<a href="https://parts.igem.org/Part:BBa_K4197007">K4197007</a>) by In-Fusion. </p>
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<p>The resulting products were transformed into Stellar cells and positive transformants were selected.</p>
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<h2>Validation</h2>
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<p>Successful colonies have shown bright pink fluorescence (Figure 1).</p>
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<div class="center">
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    <div class="thumb tnone">
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        <div class="thumbinner" style="width:80%;">
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            <a href="https://static.igem.wiki/teams/4197/wiki/results/facs/fig-56-mscarlet-petri.jpg" class="image">
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                <img alt="" src="https://static.igem.wiki/teams/4197/wiki/results/facs/fig-56-mscarlet-petri.jpg" width="100%" height=auto class="thumbimage" /></a>                  <div class="thumbcaption">
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                <div class="magnify">
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                    <a href="https://static.igem.wiki/teams/4197/wiki/results/facs/fig-56-mscarlet-petri.jpg" class="internal" title="Enlarge"></a>
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                </div>
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                <b>Figure 2: </b>Second plating of pET-21 b (+)_Ara h 2_OmpA_mScarlet-I transformed cells and pET-21 b (+)_Ana o 3_OmpA_mScarlet-I transformed Stellar cells. <b>Digestion by NotI of Ana o 3 with mRFP1 insertion.</b> 
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                The colonies were selected on LB-ampicillin plates. Pink coloring indicates the expression of the mScarlet-I.
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            </div>
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        </div>
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    </div>
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</div>
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<h2>References</h2>
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<ol>
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<li> <a href="https://parts.igem.org/Part:BBa_K4197007">K4197007</a> </li>
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<li> <a href="https://parts.igem.org/Part:BBa_K4197022">K4197022</a> </li>
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<li> <a href="https://2022.igem.wiki/toulouse-insa-ups/index.html"> DAISY (INSA-UPS 2022)</a> </li>
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</ol>
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</html>
  
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
<partinfo>BBa_K4197021 SequenceAndFeatures</partinfo>
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<partinfo>BBa_K4197003 SequenceAndFeatures</partinfo>
  
  
 
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===Functional Parameters===
 
===Functional Parameters===
<partinfo>BBa_K4197021 parameters</partinfo>
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<partinfo>BBa_K4197003 parameters</partinfo>
 
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Revision as of 18:56, 8 October 2022


Ana o 3 expression at the surface of E. coli cells sortable by FACS using mSCARLET-I

OmpA_Ana o 3 fusion + mSCARLET-I with ihfb800 promoter

Introduction

The part expressing the gene of cashew nut Ana o 3 (K4197007) has been completed with the ihfb800-mScarlet construction (K41970022) to express red fluorescence. This red fluorescence allows sorting of bacteria by FACS.

Construction

The ihfb800-mScarlet construction was amplified by PCR with the high-fidelity Phusion polymerase using IF3_mSCARLET-I F (ttatttgtacagttcatccataccacc) and IF4_mSCARLET-I R (atggtttctaaaggtgaagcagtg) primers. The expected size of the amplicon is 699 bp. The fragment was inserted on the linearized plasmid pET21b(+) with Ana o 3 (K4197007) by In-Fusion.

The resulting products were transformed into Stellar cells and positive transformants were selected.

Validation

Successful colonies have shown bright pink fluorescence (Figure 1).

Figure 2: Second plating of pET-21 b (+)_Ara h 2_OmpA_mScarlet-I transformed cells and pET-21 b (+)_Ana o 3_OmpA_mScarlet-I transformed Stellar cells. Digestion by NotI of Ana o 3 with mRFP1 insertion. The colonies were selected on LB-ampicillin plates. Pink coloring indicates the expression of the mScarlet-I.

References

  1. K4197007
  2. K4197022
  3. DAISY (INSA-UPS 2022)

Sequence and Features


Assembly Compatibility:
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