Difference between revisions of "Part:BBa K4140022"
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Therefore, we took advantage of it by attaching the 5' and 3'UTR of PEG10 to the mRNA of PAH in order to make the PEG10 protein encapsulate the PAH mRNA. | Therefore, we took advantage of it by attaching the 5' and 3'UTR of PEG10 to the mRNA of PAH in order to make the PEG10 protein encapsulate the PAH mRNA. | ||
− | == | + | ==Characterization of Mutational Landscape== |
− | + | After creating a multiple sequence alignment of the protein sequence and predicting mutational landscapes, the effect of these mutations on the evolutionary fitness of the protein is tested. The prediction of the mutational landscape by saturation mutagenesis of the Peg10 protein. The (P631D) mutation, as depicted in the chart, had the greatest score when compared to other mutations. On the other hand, it's clear that the (Q632R) had the least evolutionary fitness for Peg10 protein. As displayed in Figure(1) | |
− | + | ||
+ | [[File:Peg10.png|thumb|Right|Figure 1. (shows the mutational landscape of the Peg10 protein.) ]] | ||
+ | <br><br><br><br><br><br><br><br><br><br><br><br> | ||
==References== | ==References== |
Revision as of 11:46, 3 October 2022
Peg10
This is a paternally expressed imprinted gene that binds its own mRNA and self-assembles into virion-like extracellular vesicles that encapsulate their own mRNA and are released from cells, enabling intercellular transfer of PEG10 mRNA. It is thought to have originated from the Ty3/Gypsy family of retrotransposons
Usage
PEG10 mRNA can be transferred between cells thanks to a paternally expressed imprinted gene that binds its own mRNA and self-assembles into extracellular vesicles that resemble virion capsules. Making VLPs is one of the SEND platform's components for mRNA delivery. Therefore, we took advantage of it by attaching the 5' and 3'UTR of PEG10 to the mRNA of PAH in order to make the PEG10 protein encapsulate the PAH mRNA.
Characterization of Mutational Landscape
After creating a multiple sequence alignment of the protein sequence and predicting mutational landscapes, the effect of these mutations on the evolutionary fitness of the protein is tested. The prediction of the mutational landscape by saturation mutagenesis of the Peg10 protein. The (P631D) mutation, as depicted in the chart, had the greatest score when compared to other mutations. On the other hand, it's clear that the (Q632R) had the least evolutionary fitness for Peg10 protein. As displayed in Figure(1)
References
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 1045
Illegal PstI site found at 1747 - 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 1117
Illegal PstI site found at 1045
Illegal PstI site found at 1747 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 240
Illegal BamHI site found at 477
Illegal BamHI site found at 1160 - 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 1045
Illegal PstI site found at 1747 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 1045
Illegal PstI site found at 1747
Illegal AgeI site found at 376 - 1000COMPATIBLE WITH RFC[1000]