Difference between revisions of "Part:BBa K4347003:Design"

 
Line 5: Line 5:
 
<partinfo>BBa_K4347003 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K4347003 SequenceAndFeatures</partinfo>
  
 +
===Design - Conserved Motif Analysis===
  
−
===Design Notes===
+
MEME analysis - do later (can be same for all 6 primers)
−
TBA
+
  
  
 +
===Design - BIP Design===
  
−
===Source===
+
Primer design software used to make BIP - do later
  
−
Conserved 16s rRNA from ___ water pathogens
+
 
 +
===Considerations===
 +
 
 +
Different lengths for MEME analysis results of conserved motifs (can be same for all 6 primers) - do later
 +
 
 +
<!-- ===Source=== -->
  
 
===References===
 
===References===

Revision as of 02:48, 8 July 2022


Backward Inner primer (BIP)


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

Design - Conserved Motif Analysis

MEME analysis - do later (can be same for all 6 primers)


Design - BIP Design

Primer design software used to make BIP - do later


Considerations

Different lengths for MEME analysis results of conserved motifs (can be same for all 6 primers) - do later


References