Difference between revisions of "Part:BBa K4421003"

Revision as of 02:40, 3 June 2022

scfv library with 10 individual colonies

This part is a phage display scfv library which consists of ten kinds of individual colonies.The sequence encoding the scFv antibodies generated from cetuximab,trastuzumab, CH65, 9.8B, 2F5, F10, 7D11, 8D6, omalizumab, TE33, R10 and HC33.8 was chemically synthesized. The sequence information can be found in the Protein Data Bank. And we next aim to construct a CAR-NK-92 cell library of 10 kinds of unique CAR constructs with this part.

Usage and Biology

Antibody libraries can be constructed based on different sources, such as immunized animals or naturally immunized or infected humans, or naive immune systems, which can be derived from nonimmune natural or computational and synthetic sources.In vitro experiments, the MCF-7 cells and the derivative cells were characterized, which have been used in our previous study.A small library of 10 CAR constructs comprising antigen-specific scFv(BBa K4421003) were constructed, termed as the NK-92CTX-TTZ library.And the sequence encoding the scFv antibodies was generated from cetuximab(CTX), trastuzumab(TTZ), CH65, 9.8B, 2F5, F10, 7D11, 8D6, omalizumab, TE33, R10 and HC33.8.

Background and detail description

Tumor heterogeneity

Cancer is a dynamic disease. During the course of disease, cancers generally become more heterogeneous. As a result of this heterogeneity, the bulk tumour might include a diverse collection of cells harbouring distinct molecular signatures with differential levels of sensitivity to treatment. This heterogeneity might result in a non-uniform distribution of genetically distinct tumour-cell subpopulations across and within disease sites (spatial heterogeneity) or temporal variations in the molecular makeup of cancer cells (temporal heterogeneity). Heterogeneity provides the fuel for resistance; therefore, an accurate assessment of tumour heterogeneity is essential for the development of effective therapies. Traditional CAR-based immunotherapies tend to target only one or several targets at the same time, but none of them often lead to a lasting immune response due to tumor heterogeneity.The reason why we constuct this part is to aim at sovlving tumor heterogeneity.At first we intend to construct CAR-NK cells which carry 10 kinds of CAR and every CAR have a unique scfv sequence(BBa K4421003).

Used for a CAR---A Proposed Synthetic Immune Surveillance Platform

Antigen recognition domain

The antigen recognition domain is exposed to the outside of the cell, in the ectodomain portion of the receptor. It interacts with potential target molecules and is responsible for targeting the CAR-T cell to any cell expressing a matching molecule.

The antigen recognition domain is typically derived from the variable regions of a monoclonal antibody linked together as a single-chain variable fragment (scFv). An scFv is a chimeric protein made up of the light (VL) and heavy (VH) chains of immunoglobins, connected with a short linker peptide. These VL and VH regions are selected in advance for their binding ability to the target antigen (such as CD19). The linker between the two chains consists of hydrophilic residues with stretches of glycine and serine in them for flexibility as well as stretches of glutamate and lysine for added solubility.Single domain antibodies (e.g. VH, VHH) have been engineered and developed as antigen recognition domains in the CAR format due to their high transduction efficiency in T cells. In addition to antibody fragments, non‐antibody‐based approaches have also been used to direct CAR specificity, usually taking advantage of ligand/receptor pairs that normally bind to each other. Cytokines, innate immune receptors, TNF receptors, growth factors, and structural proteins have all been successfully used as CAR antigen recognition domains.

Sequence and Features

This part is a phage display scfv library which consists of ten kinds of individual colonies.For this reason,we can't put ten different sequences on this page.Instead,we create ten different basic part to record their sequence.They are BBa_K4421011, BBa_K4421012, BBa_K4421013, BBa_K4421014, BBa_K4421015, BBa_K4421016, BBa_K4421017, BBa_K4421018, BBa_K4421019 and BBa_K4421020.

Sequence and Features