Difference between revisions of "Part:BBa K3733008"

Revision as of 14:26, 20 October 2021

HyLα: Hybrid peptide of LL-37 and LTA

LL-37 and LTA are both affective antimicrobial peptides (AMPs). HyLα successfully combine those two AMPs by connecting the C-terminate of LTA with the N-terminate of LL-37 through GS-linker. It could neutralize Lipopolysaccharides (LPS), thus effectively blocking the downstream inflammation pathway.

Design

The plasmid we designed consists of T7 promoter, lac operator, RBS, HyLα coding sequence, His tag and T7 terminator, which are arranged in an order on a pET28 backbone. We aim to induce the transcription of the downstream HyLα by adding the IPTG to initiate the expression. The protein will then be purified and antibacterial activity was tested by culturing the Salmonella enterica subsp. Enterica (ex Kauffmann and Edwards) Le Minor and Popoff serovar Typhimurium with our purified HyLα and measuring the OD₆₀₀ to reflect the bacteria growing condition. This part has undergone codon optimization based on the bias of Escherichia coli.

Materials and Method

1.Plasmids Construction: HyLα’ coding sequence is constructed using primers by PCR from LL-37 and LTA, and then was linked by GS-linker. The constructed fragment is linked by homologous recombination. The correct construction is confirmed by sequencing.

2.Expression and Purification

    1) Plasmid pET-28a(+)-LTA (with His-tag) is transformed to Escherichia coli BL21(DE3). The E. coli strain is cultured in LB medium containing 10 μg/mL kanamycin.

    2) When the optical density of the cultured bacteria reached approximately 0.6, IPTG was added to the final concentration 50mM. And the bacteria were induced at 18℃ overnight. The harvested bacteria are resuspended with a binding buffer (Sangon Biotech, Shanghai, China), and then the bacteria are lysed by ultrasonication. Purification is performed following the instructions of Ni-NTA SefinoseTM Resin (Sangon Biotech, Shanghai, China).

    3) Salmonella Typhimurium SL1344 is cultured in LB medium at 37℃ overnight. Resuspend the cultured S. Typhimurium SL1344 by PBS. All activity tests are implemented in PBS resuspended S. Typhimurium SL1344. Culture the PBS resuspended S. Typhimurium SL1344 to OD₆₀₀ = 0.35.

    4) In the 96-well plates, 20 μl LTA solution is added to the final concentration of 8 μg/mL with 180 μl bacteria suspension in each well. Together with 20 μl Elution buffer (Sangon Biotech, Shanghai, China) added with 180 μl bacteria suspension serve as control groups. Each with three biological repeats.

    5) Use the Microplate Reader to measure OD₆₀₀ of the 96-well-plate for 2.5 hours.

    6) All experiments above are carried out in 3 biological replications.

Results

Sequence and Features