Difference between revisions of "Part:BBa K4032003"

 
Line 3: Line 3:
 
<partinfo>BBa_K4032003 short</partinfo>
 
<partinfo>BBa_K4032003 short</partinfo>
  
−
aa
+
NC_000913.3 https://www.ncbi.nlm.nih.gov/gene/948088
 +
 
 +
This part contains the gene of the amylase-RFP fusion protein.
 +
 
 +
 
 +
===Usage and Biology===
 +
 
 +
This enzyme hydrolyzes of (1-4)-alpha-D-glycosidic linkages in polysaccharides containing three or more (1-4)-alpha-linked D-glucose units. See details NC_000913.3 (https://www.ncbi.nlm.nih.gov/gene/948088).
 +
 
 +
In the case of this part,  red fluorescence of RFP is observed under the fluorescence microscope, but isn’t observed under natural light.
 +
 
 +
 
 +
This part expresses the fuse protein of amylase (from <partinfo>BBa_K523006</partinfo>) and RFP (from <partinfo>BBa_J04450</partinfo>). We removed the stop codon of amylase and the start codon of RFP and connected the ends.
 +
 
 +
 
 +
The RBS is added to this part forming <partinfo>BBa_K4032xx</partinfo>.
 +
 
 +
The lac promoter, the RBS and the double terminator are added to this part forming <partinfo>BBa_K4032xx</partinfo>.
 +
 
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Revision as of 10:31, 20 October 2021


amylase-RFP

NC_000913.3 https://www.ncbi.nlm.nih.gov/gene/948088

This part contains the gene of the amylase-RFP fusion protein.


Usage and Biology

This enzyme hydrolyzes of (1-4)-alpha-D-glycosidic linkages in polysaccharides containing three or more (1-4)-alpha-linked D-glucose units. See details NC_000913.3 (https://www.ncbi.nlm.nih.gov/gene/948088).

In the case of this part, red fluorescence of RFP is observed under the fluorescence microscope, but isn’t observed under natural light.


This part expresses the fuse protein of amylase (from BBa_K523006) and RFP (from BBa_J04450). We removed the stop codon of amylase and the start codon of RFP and connected the ends.


The RBS is added to this part forming No part name specified with partinfo tag..

The lac promoter, the RBS and the double terminator are added to this part forming No part name specified with partinfo tag..


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1200
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 336
    Illegal AgeI site found at 1501
    Illegal AgeI site found at 2580
    Illegal AgeI site found at 2692
  • 1000
    COMPATIBLE WITH RFC[1000]