Difference between revisions of "Part:BBa K3735001"

Revision as of 16:42, 18 October 2021

Coding sequence

SefA is a protein from Thaurea selenatis (a β-proteobacteria) with a size of 94.5kDa. In the process of degrading selenite, the decrease of selenite will cause the accumulation of Se⁰ in the cell, and SefA is the substance that wraps Se⁰ in Thaurea selenatis to forms SeNPs, and transport SeNPs out of the cell. But in Escherichia coli BL21, we found that SefA will only help form SeNPs and will not participate in transshipment. In our detection, we found that SeNPs are about 300nm, which is consistent with the result in the literature. In our concentration gradient experiments, we found that strains expressing more SefA grew better, which also proved that SefA can improve the resistance of bacteria to selenite at a certain extent.

SefA is a protein from Thaurea selenatis (a β-proteobacteria).During selenate respiration by Thaurea selenatis, the reduction of selenate results in the formation of intracellular selenium (Se) deposits that are ultimately secreted as Se nanospheres. Studies have found that SefA is closely related to the deposition of elemental selenium. Then the gene was cloned and expressed in Escherichia coli. The gene sequence of this part was obtained from NCBI and its GenBank Accession number is: HQ380173.1.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
INCOMPATIBLE WITH RFC[21]
Illegal BglII site found at 1476
Illegal BglII site found at 2793
23
COMPATIBLE WITH RFC[23]
25
INCOMPATIBLE WITH RFC[25]
Illegal NgoMIV site found at 268
Illegal NgoMIV site found at 583
Illegal NgoMIV site found at 709
Illegal NgoMIV site found at 1090
Illegal NgoMIV site found at 1513
Illegal NgoMIV site found at 2614
Illegal NgoMIV site found at 2863
Illegal AgeI site found at 610
Illegal AgeI site found at 1156
Illegal AgeI site found at 1312
Illegal AgeI site found at 1453
Illegal AgeI site found at 1876
Illegal AgeI site found at 2233
Illegal AgeI site found at 2404
1000
COMPATIBLE WITH RFC[1000]

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 <partinfo>BBa_K3735001 short</partinfo>
-SefA is a protein from <i>Thaurea selenatis<i/> (a β-proteobacteria) with a size of 94.5kDa. In the process of degrading selenite, the decrease of selenite will cause the accumulation of Se<sup>0</sup> in the cell, and SefA is the substance that wraps Se<sup>0</sup> in <i>Thaurea selenatis<i/> to forms SeNPs, and transport SeNPs out of the cell. But in <i>Escherichia coli<i/> BL21, we found that SefA will only help form SeNPs and will not participate in transshipment. In our detection, we found that SeNPs are about 300nm, which is consistent with the result in the literature. In our concentration gradient experiments, we found that strains expressing more SefA grew better, which also proved that SefA can improve the resistance of bacteria to selenite at a certain extent.
+SefA is a protein from <i>Thaurea selenatis</i> (a β-proteobacteria) with a size of 94.5kDa. In the process of degrading selenite, the decrease of selenite will cause the accumulation of Se<sup>0</sup> in the cell, and SefA is the substance that wraps Se<sup>0</sup> in <i>Thaurea selenatis</i> to forms SeNPs, and transport SeNPs out of the cell. But in <i>Escherichia coli</i> BL21, we found that SefA will only help form SeNPs and will not participate in transshipment. In our detection, we found that SeNPs are about 300nm, which is consistent with the result in the literature. In our concentration gradient experiments, we found that strains expressing more SefA grew better, which also proved that SefA can improve the resistance of bacteria to selenite at a certain extent.
-SefA is a protein from <i>Thaurea selenatis<i/> (a β-proteobacteria).During selenate respiration by <i>Thaurea selenatis<i/>, the reduction of selenate results in the formation of intracellular selenium (Se) deposits that are ultimately secreted as Se nanospheres. Studies have found that SefA is closely related to the deposition of elemental selenium. Then the gene was cloned and expressed in <i>Escherichia coli<i/>. The gene sequence of this part was obtained from NCBI and its GenBank Accession number is: HQ380173.1.
+SefA is a protein from <i>Thaurea selenatis</i> (a β-proteobacteria).During selenate respiration by <i>Thaurea selenatis</i>, the reduction of selenate results in the formation of intracellular selenium (Se) deposits that are ultimately secreted as Se nanospheres. Studies have found that SefA is closely related to the deposition of elemental selenium. Then the gene was cloned and expressed in <i>Escherichia coli</i>. The gene sequence of this part was obtained from NCBI and its GenBank Accession number is: HQ380173.1.
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