Difference between revisions of "Part:BBa K3380151"

 
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DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore.  
 
DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore.  
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===Characterization===
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The DIR2s-Apt fluorescent RNA aptamer was described by [https://pubs.acs.org/doi/full/10.1021/jacs.7b04211 Tan ''et al.'' (2017)].
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The iSpinach folding prediction as simulated by [http://www.nupack.org// NUPACK] is shown below.
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[[File:Part_BBa_K3380150.png|400px|iSpinach folding]]
  
 
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Revision as of 13:30, 8 October 2020


DIR2s-Apt fluorescent RNA aptamer

DIR2s-Apt is a fluorescent RNA aptamer comprising a short ribonucleotide sequence that exhibits fluorescence upon binding to a specific fluorophore.

Characterization

The DIR2s-Apt fluorescent RNA aptamer was described by Tan et al. (2017).

The iSpinach folding prediction as simulated by [http://www.nupack.org// NUPACK] is shown below.

iSpinach folding

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]