Difference between revisions of "Part:BBa K3201020"
AptamersBoi (Talk | contribs) |
|||
Line 5: | Line 5: | ||
This is an AND gate consisting of the arabinose inducible promoter and the STAR target. In the presence of arabinose and STAR, the expression of 2 antibiotic resistance genes is initiated. | This is an AND gate consisting of the arabinose inducible promoter and the STAR target. In the presence of arabinose and STAR, the expression of 2 antibiotic resistance genes is initiated. | ||
− | |||
===Usage and Biology=== | ===Usage and Biology=== | ||
− | + | This AND gate was incorporated in order to provide the means to overcome the evolutionary pressure exerted by antibiotics. We transformed bacteria with a vector containing the AND gate and the STAR and qualitatively observed whether it could work. We grew the bacteria in 0.1% arabinose, 50 µg/mL Streptomycin, and 25 μg/mL Kanamycin. Under these conditions the antibiotic genes were expected to be expressed. Indeed, as shown in Figure 1, the culture appeared cloudy. | |
+ | |||
+ | [[File:T--Athens--demo3.png|400px|thumb|center|Figure 1: Culture grown with 0.1% arabinose, 50 µg/mL Streptomycin, and 25 μg/mL Kanamycin]] | ||
+ | |||
+ | Using an inoculation loop, a sample was taken and spread onto a plate that contained no antibiotic. We did this to observe all viable cells. It appears that the AND gate functioned normally and some cells express the antibiotic genes, as shown in Figure 2. | ||
+ | [[File:T--Athens--demo1.png|400px|thumb|center|Figure 2: A sample of liquid culture was spread onto an agar plate containing no antibiotics.]] | ||
+ | |||
+ | As a control, we spread a sample of bacteria grown under the same conditions, but without arabinose. The plate itself contained 1% arabinose and Streptomycin but it seems that it was not enough to allow the cells to begin the expression of the aadA gene (resistance to Streptomycin) and therefore no viable cells were observed. | ||
+ | [[File:T--Athens--demo2.png|400px|thumb|center|Figure 3:]] | ||
<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K3201020 SequenceAndFeatures</partinfo> | <partinfo>BBa_K3201020 SequenceAndFeatures</partinfo> |
Latest revision as of 23:32, 21 October 2019
pBAD-araC STAR target with aadA and KanR
This is an AND gate consisting of the arabinose inducible promoter and the STAR target. In the presence of arabinose and STAR, the expression of 2 antibiotic resistance genes is initiated.
Usage and Biology
This AND gate was incorporated in order to provide the means to overcome the evolutionary pressure exerted by antibiotics. We transformed bacteria with a vector containing the AND gate and the STAR and qualitatively observed whether it could work. We grew the bacteria in 0.1% arabinose, 50 µg/mL Streptomycin, and 25 μg/mL Kanamycin. Under these conditions the antibiotic genes were expected to be expressed. Indeed, as shown in Figure 1, the culture appeared cloudy.
Using an inoculation loop, a sample was taken and spread onto a plate that contained no antibiotic. We did this to observe all viable cells. It appears that the AND gate functioned normally and some cells express the antibiotic genes, as shown in Figure 2.
As a control, we spread a sample of bacteria grown under the same conditions, but without arabinose. The plate itself contained 1% arabinose and Streptomycin but it seems that it was not enough to allow the cells to begin the expression of the aadA gene (resistance to Streptomycin) and therefore no viable cells were observed.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 1144
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 1983
Illegal AgeI site found at 979 - 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI site found at 961