Difference between revisions of "Part:BBa K2971002"

Revision as of 18:47, 21 October 2019

crtB from Deinococcus radiodurans

This part is the gene crtE (dr1395) from the extremophile Deinococcus radiodurans and encodes geranylgeranyl diphosphate synthase (CrtE). GGPPS catalyze the condensation of farnesyl pyrophosphate (FPP) and isopentenyl pyrophosphate (IPP) into geranylgeranyl diphosphate (GGPP). GGPP is a precursor for the carotenoid biosynthetic pathway. The sequence has been codon optimized for expression in Escherichia coli and iGEM registry compatibility.

The UiOslo 2019 team used this gene in a composite part (BBa_K2971004) to produce the red pigment lycopene, in Escherichia coli, by expressing it in a vector along with the genes crtB and crtI. The enzyme was put under the arabinose inducible promotor araC.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
INCOMPATIBLE WITH RFC[21]
Illegal BglII site found at 609
23
COMPATIBLE WITH RFC[23]
25
COMPATIBLE WITH RFC[25]
1000
COMPATIBLE WITH RFC[1000]

@@ Line 3: / Line 3: @@
 <partinfo>BBa_K2971002 short</partinfo>
-This part is crtB (phytoene synthase) in pBAD.
+This part is the gene crtE (dr1395) from the extremophile Deinococcus radiodurans and encodes
+geranylgeranyl diphosphate synthase (CrtE). GGPPS catalyze the condensation of farnesyl
+pyrophosphate (FPP) and isopentenyl pyrophosphate (IPP) into geranylgeranyl diphosphate (GGPP).
+GGPP is a precursor for the carotenoid biosynthetic pathway. The sequence has been codon optimized
+for expression in Escherichia coli and iGEM registry compatibility.
+The UiOslo 2019 team used this gene in a composite part (BBa_K2971004) to produce the red pigment lycopene, in
+Escherichia coli, by expressing it in a vector along with the genes crtB and crtI. The enzyme was put under the arabinose inducible promotor araC.
 <!-- Add more about the biology of this part here