Difference between revisions of "Part:BBa K3170600"
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Compotent of the protease-protease regulation system | Compotent of the protease-protease regulation system | ||
+ | <ul> | ||
+ | <li>One of the logic gates of the core protein pathway designed using Boolean logic. Some of them separated Porcine Parvovirus (PPVp) and then reconstituted by Link short sequence; the other part separated YFP from the terminator and linked to PPVp target sequence and CFP. The two parts are then joined by P2A, a self-cleaving small peptide, and combined into a NOR Boolean logic gate.</li> | ||
+ | <li>In the NOR logic gate, when both TEVp and TVMVp proteases are absent, the C-terminus and N-terminus of PPVp are combined into PPVp, the PPVp target sequence is cleaved, and CFP and YFP are separated, which are far apart and cannot be FRET. YFP does not emit light, and the CFP absorbs the excitation light and emits cyan fluorescence. When any one of the proteases or both proteases is present, the target sequence of one of the proteases or the two proteases is cleaved, and the C-terminal and N-terminal portions of the PPVp cannot be combined into PPVp. Therefore, the PPVp target sequence is not cleaved, FRET occurs, the fluorescence emitted by CFP absorbs the excitation light is absorbed by YFP, and YFP emits yellow fluorescence.</li> | ||
+ | <li>For NOR logic gates, there are two inputs: the presence or absence of two proteases, TEVp and TVMVp, when the protease is present, ie the input value is 1, otherwise 0; there is an output: CFP luminescence or not, when CFP illuminates, The output is 1, otherwise it is 0.</li> | ||
+ | </ul> | ||
+ | |||
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Revision as of 14:29, 21 October 2019
NOR Boolean logic gate
Compotent of the protease-protease regulation system
- One of the logic gates of the core protein pathway designed using Boolean logic. Some of them separated Porcine Parvovirus (PPVp) and then reconstituted by Link short sequence; the other part separated YFP from the terminator and linked to PPVp target sequence and CFP. The two parts are then joined by P2A, a self-cleaving small peptide, and combined into a NOR Boolean logic gate.
- In the NOR logic gate, when both TEVp and TVMVp proteases are absent, the C-terminus and N-terminus of PPVp are combined into PPVp, the PPVp target sequence is cleaved, and CFP and YFP are separated, which are far apart and cannot be FRET. YFP does not emit light, and the CFP absorbs the excitation light and emits cyan fluorescence. When any one of the proteases or both proteases is present, the target sequence of one of the proteases or the two proteases is cleaved, and the C-terminal and N-terminal portions of the PPVp cannot be combined into PPVp. Therefore, the PPVp target sequence is not cleaved, FRET occurs, the fluorescence emitted by CFP absorbs the excitation light is absorbed by YFP, and YFP emits yellow fluorescence.
- For NOR logic gates, there are two inputs: the presence or absence of two proteases, TEVp and TVMVp, when the protease is present, ie the input value is 1, otherwise 0; there is an output: CFP luminescence or not, when CFP illuminates, The output is 1, otherwise it is 0.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NotI site found at 2996
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 283
Illegal BamHI site found at 1066
Illegal BamHI site found at 2264 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 2288
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1102
Illegal BsaI.rc site found at 1282