Difference between revisions of "Part:BBa K3170605"

 
Line 4: Line 4:
  
 
Compotent of the protease-protease regulation system
 
Compotent of the protease-protease regulation system
 +
<ul>
 +
<li>One of the logic gates of the core protein pathway designed using Boolean logic. We will remove the target sequence of tobacco etch virus protease (TEVp) and the target sequence of tobacco vein vein virus protease (TVMVp) from the CFP of the terminator, and then add a YFP to each of the TEVp target sequence and the TVMVp target sequence. (Where the left YFP does not contain a terminator), combined into an AND Boolean logic gate.</li>
 +
<li>In the AND logic gate, when both TEVp and TVMVp proteases are absent, FRET occurs, CFP absorbs the excitation light and the fluorescence emitted by YFP is absorbed, and YFP emits yellow fluorescence. When two proteases are present, the TEVp target sequence and the TVMVp target sequence are cleaved, CFP and two YFPs are separated, YFP is far from CFP, and FRET cannot be performed between the two, so YFP does not emit light, and CFP absorbs at this time. Excitation light emits cyan fluorescence. When only one protease is present, one of the protease target sequences is cleaved, one YFP is separated, and the other YFP is linked to CFP, FRET occurs, the fluorescence emitted by CFP is absorbed by YFP, and YFP emits yellow fluorescence.</li>
 +
<li>For AND logic gates, there are two inputs: the presence or absence of two proteases, TEVp and TVMVp, when the protease is present, ie the input value is 1, otherwise 0; there is an output: CFP luminescence or not, when CFP is illuminated The output value is 1, otherwise the output value is 0 if the CFP does not emit light or the light is weak.</li>
 +
</ul>
 +
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Revision as of 14:25, 21 October 2019


AND Boolean logic gate

Compotent of the protease-protease regulation system

  • One of the logic gates of the core protein pathway designed using Boolean logic. We will remove the target sequence of tobacco etch virus protease (TEVp) and the target sequence of tobacco vein vein virus protease (TVMVp) from the CFP of the terminator, and then add a YFP to each of the TEVp target sequence and the TVMVp target sequence. (Where the left YFP does not contain a terminator), combined into an AND Boolean logic gate.
  • In the AND logic gate, when both TEVp and TVMVp proteases are absent, FRET occurs, CFP absorbs the excitation light and the fluorescence emitted by YFP is absorbed, and YFP emits yellow fluorescence. When two proteases are present, the TEVp target sequence and the TVMVp target sequence are cleaved, CFP and two YFPs are separated, YFP is far from CFP, and FRET cannot be performed between the two, so YFP does not emit light, and CFP absorbs at this time. Excitation light emits cyan fluorescence. When only one protease is present, one of the protease target sequences is cleaved, one YFP is separated, and the other YFP is linked to CFP, FRET occurs, the fluorescence emitted by CFP is absorbed by YFP, and YFP emits yellow fluorescence.
  • For AND logic gates, there are two inputs: the presence or absence of two proteases, TEVp and TVMVp, when the protease is present, ie the input value is 1, otherwise 0; there is an output: CFP luminescence or not, when CFP is illuminated The output value is 1, otherwise the output value is 0 if the CFP does not emit light or the light is weak.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 1449
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]