Difference between revisions of "Part:BBa K2973015"
Akatsaouni (Talk | contribs) |
Akatsaouni (Talk | contribs) |
||
Line 3: | Line 3: | ||
<partinfo>BBa_K2973015 short</partinfo> | <partinfo>BBa_K2973015 short</partinfo> | ||
− | Hepatitis B is a DNA virus that attacks the liver and can cause both acute and chronic | + | <i>Hepatitis B</i> is a DNA virus that attacks the liver and can cause both acute and chronic diseases. |
− | This part represents a small fragment of the virus' genome. It is a small DNA fragment(280 bp), that does not encode for any functional protein or toxin. It's a small part of a sequence that encodes for a DNA polymerase of the virus and in alternative reading frames it encodes for envelope proteins of the virus, or for a specific surface antigen. | + | This part represents a small fragment of the virus's genome. It is a small DNA fragment(280 bp), that does not encode for any functional protein or toxin. It's a small part of a sequence that encodes for a DNA polymerase of the virus and in alternative reading frames it encodes for envelope proteins of the virus, or for a specific surface antigen. |
===Usage and Biology=== | ===Usage and Biology=== | ||
− | This part serves as a DNA template for amplification reactions (biomarker). In our project, we | + | This part serves as a DNA template for amplification reactions (biomarker). In our project, we successfully amplified a specific region of the part using PCR and Recombinase Polymerase Amplification (RPA). |
PCR Reaction: | PCR Reaction: |
Latest revision as of 12:58, 21 October 2019
Hepatitis B Virus fragment (281-560bp)
Hepatitis B is a DNA virus that attacks the liver and can cause both acute and chronic diseases. This part represents a small fragment of the virus's genome. It is a small DNA fragment(280 bp), that does not encode for any functional protein or toxin. It's a small part of a sequence that encodes for a DNA polymerase of the virus and in alternative reading frames it encodes for envelope proteins of the virus, or for a specific surface antigen.
Usage and Biology
This part serves as a DNA template for amplification reactions (biomarker). In our project, we successfully amplified a specific region of the part using PCR and Recombinase Polymerase Amplification (RPA).
PCR Reaction:
RPA reaction after cleanup of the amplified product:
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 210
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]