Difference between revisions of "Part:BBa K3221205"
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=='''iGEM19_SCU-China:'''== | =='''iGEM19_SCU-China:'''== | ||
<p>The yamilCP was improved from amilCP(Part:[https://parts.igem.org/Part:BBa_K592009 BBa_K592009]), which is a blue chromoprotein gene from <i>Acropora millepora</i> submitted by Team Uppsala-Sweden 2011.</p> | <p>The yamilCP was improved from amilCP(Part:[https://parts.igem.org/Part:BBa_K592009 BBa_K592009]), which is a blue chromoprotein gene from <i>Acropora millepora</i> submitted by Team Uppsala-Sweden 2011.</p> | ||
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<p>We expected amilCP to be expressed efficiently in <i>S. cerevisiae</i>, so we chose amilCP to be improved. We processed codon optimization on original amilCP sequence and added a consensus sequence (AAAAAA) for its usage in <i>S. cerevisiae</i>. And the new sequence was named yamilCP.</p> | <p>We expected amilCP to be expressed efficiently in <i>S. cerevisiae</i>, so we chose amilCP to be improved. We processed codon optimization on original amilCP sequence and added a consensus sequence (AAAAAA) for its usage in <i>S. cerevisiae</i>. And the new sequence was named yamilCP.</p> | ||
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<p>We respectively cloned the amilCP and yamilCP on the vector of pYES2-NTA.There are the maps of pYES2-amilCP and pYES2-yamilCP (Figure.1 and Figure.2). And we verified the construction of them by double restriction enzymes digestion and sequencing (Figure.3).</p> | <p>We respectively cloned the amilCP and yamilCP on the vector of pYES2-NTA.There are the maps of pYES2-amilCP and pYES2-yamilCP (Figure.1 and Figure.2). And we verified the construction of them by double restriction enzymes digestion and sequencing (Figure.3).</p> | ||
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<p>Then we transformed pYES2-amilCP and pYES2-yamilCP into <i>S. cerevisiae</i> respectively and successfully observed the expression of blue chromoprotein with the induction of galactose (Figure.4).</p> | <p>Then we transformed pYES2-amilCP and pYES2-yamilCP into <i>S. cerevisiae</i> respectively and successfully observed the expression of blue chromoprotein with the induction of galactose (Figure.4).</p> | ||
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<p>To test the expression of pYES2-amilCP and pYES2-yamilCP in <i>S. cerevisiae</i>, we transformed them into <i>S. cerevisiae</i> BY4741 and used galactose to induce blue chromoprotein expression. After 10 days, we observed blue colony on the pYES2-yamilCP plate at first and there was no blue colony on the pYES2-amilCP plate, which confirmed that yamilCP express more quickly than amilCP (Figure.5). It shows that our improvement is successful.</p> | <p>To test the expression of pYES2-amilCP and pYES2-yamilCP in <i>S. cerevisiae</i>, we transformed them into <i>S. cerevisiae</i> BY4741 and used galactose to induce blue chromoprotein expression. After 10 days, we observed blue colony on the pYES2-yamilCP plate at first and there was no blue colony on the pYES2-amilCP plate, which confirmed that yamilCP express more quickly than amilCP (Figure.5). It shows that our improvement is successful.</p> | ||
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<p>As the result, the improved yamilCP was successfully expressed, and the expression of yamilCP is more quickly than that of amilCP in <i>S. cerevisiae</i>. </p> | <p>As the result, the improved yamilCP was successfully expressed, and the expression of yamilCP is more quickly than that of amilCP in <i>S. cerevisiae</i>. </p> | ||
Revision as of 09:20, 20 October 2019
YamilCP is a CDS of blue chromoprotein in S. cerevisiae.
YamilCP is a CDS of chromoprotein which can exhibit strong blue color in S. cerevisiae. It was optimized for S. cerevisiae on the basis of amilCP(BBa_K592009) which is encouraged by Team Uppsala-Sweden 2011. It acts as a reporter in our project to determine the function of Gal1 promoter (pGAL1) and Met3 promoter (pMet3).
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
iGEM19_SCU-China:
The yamilCP was improved from amilCP(Part:BBa_K592009), which is a blue chromoprotein gene from Acropora millepora submitted by Team Uppsala-Sweden 2011.
We expected amilCP to be expressed efficiently in S. cerevisiae, so we chose amilCP to be improved. We processed codon optimization on original amilCP sequence and added a consensus sequence (AAAAAA) for its usage in S. cerevisiae. And the new sequence was named yamilCP.
We respectively cloned the amilCP and yamilCP on the vector of pYES2-NTA.There are the maps of pYES2-amilCP and pYES2-yamilCP (Figure.1 and Figure.2). And we verified the construction of them by double restriction enzymes digestion and sequencing (Figure.3).
Then we transformed pYES2-amilCP and pYES2-yamilCP into S. cerevisiae respectively and successfully observed the expression of blue chromoprotein with the induction of galactose (Figure.4).
To test the expression of pYES2-amilCP and pYES2-yamilCP in S. cerevisiae, we transformed them into S. cerevisiae BY4741 and used galactose to induce blue chromoprotein expression. After 10 days, we observed blue colony on the pYES2-yamilCP plate at first and there was no blue colony on the pYES2-amilCP plate, which confirmed that yamilCP express more quickly than amilCP (Figure.5). It shows that our improvement is successful.
As the result, the improved yamilCP was successfully expressed, and the expression of yamilCP is more quickly than that of amilCP in S. cerevisiae.
Figure. 1 The map of plasmid pYES2-amilCP
Figure. 2 The map of plasmid pYES2-yamilCP
Figure. 3 The double restriction enzyme digestion verification result. lane 1: pYES2-amilCP plasmid, lane 2: pYES2-amilCP plasmid digestion, lane 3: pYES2-yamilCP plasmid, lane4: pYES2-amilCP plasmid digestion, Marker：Trans 2K plus Ⅱ Marker.
Figure. 4 The colony transformed pYES2-amilCP and pYES2-yamilCP expressed blue chromoprotein.
Figure. 5 The transformation results of pYES2-amilCP and pYES2-yamilCP into S. cerevisiae BY4741 with galactose induction after 10 days.