Difference between revisions of "Part:BBa K2983015"

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__NOTOC__
 
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<partinfo>BBa_K2983015 short</partinfo>
 
<partinfo>BBa_K2983015 short</partinfo>
 
This part is a Loop Type IIS Golden gate adapter that contains a BsaI and a SapI restriction sites.
 
  
 
This part is a Loop Type IIS Golden gate adapter that contains a BsaI and a SapI restriction sites.
 
This part is a Loop Type IIS Golden gate adapter that contains a BsaI and a SapI restriction sites.

Revision as of 13:36, 19 October 2019


Loop F-Epsilon

This part is a Loop Type IIS Golden gate adapter that contains a BsaI and a SapI restriction sites.

Usage and Biology=

The Loop Type IIS cloning sites (triangles in figure 1) are a combination of BsaI and SapI restriction sites each with different cutting sites that generate well defined overhangs (circles in Figure 1).The sequence of the Loop F-Epsilon is as fellow : GGTCTCACGCTACAGTGAAGAGC

Figure1: Loop F-Espilon structure


Blue triangle: SapI fixation site (GCTCTTC)

Red triangle : BsaI fixation site (GAGACC)

Blue circle : overhang formed by SapI after cutting (CAG)

Yellow circle: overhang formed by BasI after cutting (CGCT)



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1
    Illegal SapI.rc site found at 17