Difference between revisions of "Part:BBa K2922026"

 
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<partinfo>BBa_K2922026 short</partinfo>
 
<partinfo>BBa_K2922026 short</partinfo>
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===Summary===
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Lysis proteins are required for both colicin release and partial cell lysis.
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Abbreviated as Ekil, lysis protein for Colicin-E1 is a 4.8 kDa protein, which is encoded by gene <i>kil</i>.The lysis protein is required for both Colicin-E1 release and partial cell lysis. [1] (Fig.1)
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<table><tr><th>[[File:E1design.png|thumb|300px|Fig.1 Ekil helps Colicin-E1 release and makes partial cell lysis.]]</th><th></table>
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===Identification===
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===Usage and Biology===
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When we are building this circuit, we are doing the nucleic acid gel electrophoresis experiment to verify. After the circuit is built, we send the plasmid to sequence, and get the correct sequencing.
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After new molecular cloning experiments, we do Enzyme-Cut identification to certify the plasmid is correct. We use the <i>Xba</i>I and <i>Pst</i>I to cut the plasmid, then we getting the target separate fragment-138bp. (Fig.2)
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<table><tr><th>[[File:Nkil-Ekil.png|thumb|300px|Fig.2 The result of this plasmid cut with enzyme <i>Xba</i>I and <i>Pst</i>I.]]</th><th></table>
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<span class='h3bb'>Sequence and Features</span>
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===Reference===
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[1] E. Cascales et al., Colicin biology. Microbiol Mol Biol Rev 71, 158-229 (2007).
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===Sequence and Features===
 
<partinfo>BBa_K2922026 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K2922026 SequenceAndFeatures</partinfo>
  

Revision as of 13:25, 19 October 2019


Lysis protein for colicin-E1 coding region

Summary

Abbreviated as Ekil, lysis protein for Colicin-E1 is a 4.8 kDa protein, which is encoded by gene kil.The lysis protein is required for both Colicin-E1 release and partial cell lysis. [1] (Fig.1)

Fig.1 Ekil helps Colicin-E1 release and makes partial cell lysis.

Identification

When we are building this circuit, we are doing the nucleic acid gel electrophoresis experiment to verify. After the circuit is built, we send the plasmid to sequence, and get the correct sequencing. After new molecular cloning experiments, we do Enzyme-Cut identification to certify the plasmid is correct. We use the XbaI and PstI to cut the plasmid, then we getting the target separate fragment-138bp. (Fig.2)

Fig.2 The result of this plasmid cut with enzyme XbaI and PstI.

Reference

[1] E. Cascales et al., Colicin biology. Microbiol Mol Biol Rev 71, 158-229 (2007).

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 118
  • 1000
    COMPATIBLE WITH RFC[1000]