Difference between revisions of "Part:BBa K2986009"
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<partinfo>BBa_K2986009 short</partinfo> | <partinfo>BBa_K2986009 short</partinfo> | ||
− | + | <h1>Usage and Biology</h1> | |
− | + | We construct a plasmid that can be controlled by blue light, it was composite with the 5xUAS-mRuby-hGluc-IL8. We used a light-switch transactivator named GVAPO, which can bind to promoter and initiates transcription of upstream gene in a short time. | |
− | + | And 5xUASis a site for GVAPO binding and perform its function. After light activation, GVAP homodimerizes and interacts with this sequence to initiates expression of gene interest.We use mRuby to be a reporter of our target gene expression (cytokine secretion), and to obtain better indicators for long-term observation, we need to replace cytokines with Humanized Gaussia luciferase (hGluc). P2A is 2A peptide allows an open reading frame (ORF) to translate a peptide chain into several independent peptide chains. we added the target gene Interleukin 8(IL-8), we wanted to use hGluc and mRuby to indicate the expression and secretion process of IL-8. | |
+ | [[File:T-SUSTECH ZHILI.png|450px|thumb|center|Figure1.plasmid with 5xUAS-mRuby-hGluc-IL8]] | ||
+ | |||
+ | |||
+ | <h2>Properties</h2> | ||
+ | We used hGluc as a long-term indicator for the target gene expression, and we get the data after 48 hrs blue light exposure. We contrasted IL-8 expression with the control group. | ||
+ | we can see from the data that IL-8 transcription process is influenced by the light exposure time. | ||
+ | [[File:T--sustech-il8.jpeg|450px|thumb|center|Figure2.IL-8 mRNA expression amount under blue light exposure]] | ||
− | |||
<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K2986009 SequenceAndFeatures</partinfo> | <partinfo>BBa_K2986009 SequenceAndFeatures</partinfo> |
Revision as of 08:36, 19 October 2019
5*UAS-mRuby-hGluc-IL8
Usage and Biology
We construct a plasmid that can be controlled by blue light, it was composite with the 5xUAS-mRuby-hGluc-IL8. We used a light-switch transactivator named GVAPO, which can bind to promoter and initiates transcription of upstream gene in a short time. And 5xUASis a site for GVAPO binding and perform its function. After light activation, GVAP homodimerizes and interacts with this sequence to initiates expression of gene interest.We use mRuby to be a reporter of our target gene expression (cytokine secretion), and to obtain better indicators for long-term observation, we need to replace cytokines with Humanized Gaussia luciferase (hGluc). P2A is 2A peptide allows an open reading frame (ORF) to translate a peptide chain into several independent peptide chains. we added the target gene Interleukin 8(IL-8), we wanted to use hGluc and mRuby to indicate the expression and secretion process of IL-8.
Properties
We used hGluc as a long-term indicator for the target gene expression, and we get the data after 48 hrs blue light exposure. We contrasted IL-8 expression with the control group. we can see from the data that IL-8 transcription process is influenced by the light exposure time.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 120
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 167
Illegal BamHI site found at 906
Illegal XhoI site found at 49 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 189
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1527
Illegal SapI.rc site found at 210