Difference between revisions of "Part:BBa K3022002"
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<h2>iGEM2019_Nanjing China Experiment</h2>
 
<h2>iGEM2019_Nanjing China Experiment</h2>
 
<p>This year our team develops a simple solo medium-copy plasmid-based polyphosphate kinase (PPK1) overexpression strategy for achieving maximum intracellular polyphosphate accumulation, so the data can provide some reference to this part.</p>
 
<p>This year our team develops a simple solo medium-copy plasmid-based polyphosphate kinase (PPK1) overexpression strategy for achieving maximum intracellular polyphosphate accumulation, so the data can provide some reference to this part.</p>
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<p>We test supernatant Pi concentration and optical density of CPP and CWT in Synthetic municipal wastewater(SMW).
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<p>We test supernatant Pi concentration and optical density of CPP and CWT in Synthetic municipal wastewater(SMW).</p>
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Ps:
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<p>Ps:
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SMW means Synthetic municipal wastewater
+
SMW means Synthetic municipal wastewater</p>
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CPP means solo medium-copy C. f reundii ATCC8090 ppk in C. f reundii ATCC8090
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<p>CPP means solo medium-copy C. f reundii ATCC8090 ppk in C. f reundii ATCC8090</p>
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CWT means wild type C. f reundii ATCC8090</p>
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<p>CWT means wild type C. f reundii ATCC8090</p>
  
 
<p>[[File:T--Nanjing-China--silver1.png|800px|thumb|center|Figure 1）Pi absorption&release]] </p>
 
<p>[[File:T--Nanjing-China--silver1.png|800px|thumb|center|Figure 1）Pi absorption&release]] </p>

Revision as of 14:17, 16 October 2019


ppk1 in Citrobacter freundii ATCC 8090

Natural function of part: The polyphosphate kinase in Citrobacter freundii ATCC 8090 is responsible for its intracellular inorganic polyphosphate (polyP) production via reversibly catalyzing the transfer of terminal phosphate from ATP to a growing polyP chain.

Wild-type Citrobacter freundii ATCC 8090 was purchased from China Center of Industrial Culture Collection (CICC, China). The ppk1 gene was acquired by PCR. This organism is our chasiss, in which its native PPK1 will be overexpressed with a plasmid of medium-copy numbers.

Although PPKs from E. coli and C. freundii shares 96% amino acids’ identity, the C. freundii PPK has a glutamate and a lysine residue in positions 327 and 328, where in E. coli they are substituted by much less strongly charged alanine and glutamine residues, respectively. Although these natural occurred mutation sites found in C. freundii PPK are distant from the enzymes’ active site, they lie in the interfaces among monomers of the PPK tetramer. Benefit from this difference, a dramatic increase of intracellular polyP accumulation can be achieved with C. freundii.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


iGEM2019_Nanjing China Experiment

This year our team develops a simple solo medium-copy plasmid-based polyphosphate kinase (PPK1) overexpression strategy for achieving maximum intracellular polyphosphate accumulation, so the data can provide some reference to this part.

We test supernatant Pi concentration and optical density of CPP and CWT in Synthetic municipal wastewater(SMW).

Ps: SMW means Synthetic municipal wastewater

CPP means solo medium-copy C. f reundii ATCC8090 ppk in C. f reundii ATCC8090

CWT means wild type C. f reundii ATCC8090

Figure 1）Pi absorption&release

Figure 2）Optical density of CPP grown in SMW compared with CWT

Reference: Wang X , Wang X , Hui K , et al. Highly Effective Polyphosphate Synthesis, Phosphate Removal and Concentration Using Engineered Environmental Bacteria Based on a Simple Solo Medium-copy Plasmid Strategy[J]. Environmental Science & Technology, 2017:acs.est.7b04532.