Difference between revisions of "Part:BBa K3039004"
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The native predicted signal peptide (Met1-Ala19) was removed from the WT MHETase sequence (Palm et al 2019) and replaced with a start codon (Met), however all mutations are numbered according to the full-length WT sequence. The amino acid sequence was submitted to Twist Bioscience who codon optimised the sequence for <I>E. coli</I>, ensuring that there were no forbidden restriction sites, BsaI or SapI, to allow for potential TypeIIS assembly. The resulting CDS was synthesised and cloned, by Twist, into pET28. This added a 63 AA His-tag and thrombin cleavage site to the N-terminal of the protein, a T7 promoter and T7 terminator. | The native predicted signal peptide (Met1-Ala19) was removed from the WT MHETase sequence (Palm et al 2019) and replaced with a start codon (Met), however all mutations are numbered according to the full-length WT sequence. The amino acid sequence was submitted to Twist Bioscience who codon optimised the sequence for <I>E. coli</I>, ensuring that there were no forbidden restriction sites, BsaI or SapI, to allow for potential TypeIIS assembly. The resulting CDS was synthesised and cloned, by Twist, into pET28. This added a 63 AA His-tag and thrombin cleavage site to the N-terminal of the protein, a T7 promoter and T7 terminator. | ||
− | <img style="width:50%; margin-left:auto; margin-right:auto; display:block; margin-top: 10px;" src="https://static.igem.org/mediawiki/parts/b/b9/T--Exeter--MHETaseW397A1.png"> | + | <figure style="border:solid black 2px;"> |
+ | <img style="width:50%; margin-left:auto; margin-right:auto; display:block; margin-top: 10px;" src="https://static.igem.org/mediawiki/parts/b/b9/T--Exeter--MHETaseW397A1.png"> | ||
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Revision as of 10:18, 1 October 2019
MHETase W397A
The enzymes PETase and MHETase were first discovered in Ideonella sakaiensis in 2016 by a group of researchers in Japan. These enzymes were found to degrade polyethylene terephthalate (PET) into its monomers, terephthalic acid (TPA) and ethylene glycol (EG). PETase degrades PET into Mono-(2-hydroxyethyl)terephthalic acid (MHET), Bis(2-Hydroxyethyl) terephthalate (BHET) and TPA, the main product being MHET. MHET is further degraded by MHETase into TPA and EG. We are aiming to use mutants of these enzymes to degrade the microfibres that are coming off clothing during washing cycles. The enzymes would be secreted into a filter that captures the microfibres. This sequence is the Escherichia coli K12 (E. coli K12) codon optimized DNA of the W397A mutant MHETase, with an attached His tag. The His tag was attached in order to more easily identify the enzymes. The wild type MHETase doesn’t show BHET degrading activity. This mutation has been reported in past papers to give MHETase the ability to degrade BHET.
The native predicted signal peptide (Met1-Ala19) was removed from the WT MHETase sequence (Palm et al 2019) and replaced with a start codon (Met), however all mutations are numbered according to the full-length WT sequence. The amino acid sequence was submitted to Twist Bioscience who codon optimised the sequence for E. coli, ensuring that there were no forbidden restriction sites, BsaI or SapI, to allow for potential TypeIIS assembly. The resulting CDS was synthesised and cloned, by Twist, into pET28. This added a 63 AA His-tag and thrombin cleavage site to the N-terminal of the protein, a T7 promoter and T7 terminator.
<figure style="border:solid black 2px;">
<img style="width:50%; margin-left:auto; margin-right:auto; display:block; margin-top: 10px;" src="">
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 260
Illegal PstI site found at 1021 - 12INCOMPATIBLE WITH RFC[12]Illegal PstI site found at 260
Illegal PstI site found at 1021 - 21COMPATIBLE WITH RFC[21]
- 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 260
Illegal PstI site found at 1021 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 260
Illegal PstI site found at 1021 - 1000COMPATIBLE WITH RFC[1000]