Difference between revisions of "Help:Sequence Analysis:Definitions"
(Definitions for sequence readings) |
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! Bad Sequencing | ! Bad Sequencing | ||
| − | | The sequence readings were of too poor quality to be used. | + | | The sequence readings were of too poor quality to be used. (If a read has a prefix or suffix, it cannot be declared bad. Or if the first 900 bases are 'well' called, the read cannot be considered bad.) |
|- | |- | ||
! None | ! None | ||
| No sequence readings are stored in the database for this part. | | No sequence readings are stored in the database for this part. | ||
|} | |} | ||
Revision as of 11:27, 6 June 2008
Definitions for Sequence Readings
| Confirmed | Every base in the part is confirmed by a base in the sequence readings |
|---|---|
| Partially Confirmed | Every base in the part is confirmed by a base in the sequence readings or the base in the sequence reading is not called. |
| Inconsistent | Some bases in the part are contradicted by all bases in the sequence readings. |
| Long Part | The part is too long to be covered by the sequence readings. |
| Bad Sequencing | The sequence readings were of too poor quality to be used. (If a read has a prefix or suffix, it cannot be declared bad. Or if the first 900 bases are 'well' called, the read cannot be considered bad.) |
| None | No sequence readings are stored in the database for this part. |