Difference between revisions of "Part:BBa K2675001"
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<partinfo>BBa_K2675001 short</partinfo> | <partinfo>BBa_K2675001 short</partinfo> | ||
| − | This part is an ''Escherichia coli'' K12 codon optimized version of AimP, the immature arbitrium peptide of phage phi3T. The optimization has been performed with help of [http://www.jcat.de/ JCAT] based on the original phi3T AimP sequence ([[Part:BBa_K2279001|BBa_K2279001]]). | + | This part is an ''Escherichia coli'' K12 codon optimized version of AimP, the immature arbitrium peptide of phage phi3T. The optimization has been performed with help of [http://www.jcat.de/ JCAT] based on the original phi3T AimP sequence ([[Part:BBa_K2279001|BBa_K2279001]]). |
| + | Before optimization, the CAI-Value of the original sequence was 0.2800 with a 38.0% GC-Content. The optimization allows a CAI-Value for the improved sequence of 0.8735 with a 50.4% GC-Content. | ||
===Usage and Biology=== | ===Usage and Biology=== | ||
Revision as of 09:28, 6 October 2018
AimP of phage phi3T
This part is an Escherichia coli K12 codon optimized version of AimP, the immature arbitrium peptide of phage phi3T. The optimization has been performed with help of [http://www.jcat.de/ JCAT] based on the original phi3T AimP sequence (BBa_K2279001). Before optimization, the CAI-Value of the original sequence was 0.2800 with a 38.0% GC-Content. The optimization allows a CAI-Value for the improved sequence of 0.8735 with a 50.4% GC-Content.
Usage and Biology
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]